RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CDK5RAP3Q96JB5 506 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 LOXL4Q96JB6 756 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 TSPAN18Q96SJ8 248 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 TMEM209Q96SK2 561 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 TASP1Q9H6P5 420 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 RPF1Q9H9Y2 349 aaKnown RBP15.47■□□□□ 0.07
VARS-228ENST00000495010 C2orf42Q9NWW7 574 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 HSFX1Q9UBD0 423 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 PCDHB6Q9Y5E3 794 aa15.47■□□□□ 0.07
VARS-228ENST00000495010 LACTBL1A8MY62 500 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 ZNF806P0C7X5 589 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 PAX3P23760 479 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 PRPHP41219 470 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 TNFSF9P41273 254 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 MCM2P49736 904 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 GUCY2FP51841 1108 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 LIMK1P53667 647 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 CYP4F8P98187 520 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 TNK2Q07912 1038 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 GRSF1Q12849 480 aaKnown RBP eCLIP15.46■□□□□ 0.07
VARS-228ENST00000495010 SF3A2Q15428 464 aaKnown RBP15.46■□□□□ 0.07
VARS-228ENST00000495010 ZBTB6Q15916 424 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 CCDC6Q16204 474 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 MGAT5BQ3V5L5 792 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 WDR44Q5JSH3 913 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 KCNK18Q7Z418 384 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 METTL23Q86XA0 190 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 SENP8Q96LD8 212 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 LRRC3BQ96PB8 259 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 MKNK1Q9BUB5 465 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 KCND2Q9NZV8 630 aa15.46■□□□□ 0.07
VARS-228ENST00000495010 LARSQ9P2J5 1176 aaKnown RBP15.46■□□□□ 0.07
VARS-228ENST00000495010 KMT2BQ9UMN6 2715 aaPredicted RBP15.45■□□□□ 0.06
VARS-228ENST00000495010 HNRNPDLO14979 420 aaKnown RBP15.45■□□□□ 0.06
VARS-228ENST00000495010 EXTL3O43909 919 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 EPN2O95208 641 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 PRAMEF12O95522 483 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 WEE1P30291 646 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 PXNP49023 591 aaPredicted RBP15.45■□□□□ 0.06
VARS-228ENST00000495010 LILRA4P59901 499 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 AMPD2Q01433 879 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 SLC39A12Q504Y0 691 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 N4BP2L1Q5TBK1 243 aaPredicted RBP15.45■□□□□ 0.06
VARS-228ENST00000495010 CD302Q8IX05 232 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 THEM5Q8N1Q8 247 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 KCTD17Q8N5Z5 321 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 TTC9BQ8N6N2 239 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 SYT2Q8N9I0 419 aaPredicted RBP15.45■□□□□ 0.06
VARS-228ENST00000495010 PLIN2Q99541 437 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 LPIN3Q9BQK8 851 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 GKN1Q9NS71 199 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 ZMYM5Q9UJ78 669 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 DSEQ9UL01 958 aa15.45■□□□□ 0.06
VARS-228ENST00000495010 NUP210Q8TEM1 1887 aaPredicted RBP15.44■□□□□ 0.06
VARS-228ENST00000495010 CCDC163A0A0D9SF12 145 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 U2AF2P26368 475 aaKnown RBP eCLIP15.44■□□□□ 0.06
VARS-228ENST00000495010 AVPR1AP37288 418 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
VARS-228ENST00000495010 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
VARS-228ENST00000495010 BFSP1Q12934 665 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 SPATA1Q5VX52 437 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 KBTBD6Q86V97 674 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 EXOC4Q96A65 974 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 ZSCAN31Q96LW9 406 aaPredicted RBP15.44■□□□□ 0.06
VARS-228ENST00000495010 MMTAG2Q9BU76 263 aaKnown RBP15.44■□□□□ 0.06
VARS-228ENST00000495010 MSTO1Q9BUK6 570 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 HAPLN2Q9GZV7 340 aa15.44■□□□□ 0.06
VARS-228ENST00000495010 SMG9Q9H0W8 520 aaKnown RBP15.44■□□□□ 0.06
VARS-228ENST00000495010 PPEF2O14830 753 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 OGTO15294 1046 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 PLA2G4BP0C869 781 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 HOXC13P31276 330 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 NCKAP1LP55160 1127 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 RUNX3Q13761 415 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 ENOX2Q16206 610 aaKnown RBP15.43■□□□□ 0.06
VARS-228ENST00000495010 IL17AQ16552 155 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 STPG1Q5TH74 334 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 JADE1Q6IE81 842 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 CC2D1AQ6P1N0 951 aaPredicted RBP15.43■□□□□ 0.06
VARS-228ENST00000495010 CMTM8Q8IZV2 173 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 GIPC2Q8TF65 315 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 C2orf15Q8WU43 125 aaKnown RBP15.43■□□□□ 0.06
VARS-228ENST00000495010 SLC46A2Q9BY10 475 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 PCDHGA5Q9Y5G8 931 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 MYH11P35749 1972 aa15.43■□□□□ 0.06
VARS-228ENST00000495010 NPHP3-ACAD11A0A0J9YXS1 232 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 K7ENM7 598 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 AKAP3O75969 853 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 SCP2P22307 547 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 PMLP29590 882 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 RAP1GAPP47736 663 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 CDR1P51861 262 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 SLC12A3P55017 1021 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 SMARCB1Q12824 385 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 TMEM132DQ14C87 1099 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 TMEM196Q5HYL7 178 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 HYIQ5T013 277 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 CAMKK1Q8N5S9 505 aa15.42■□□□□ 0.06
VARS-228ENST00000495010 MYCT1Q8N699 235 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms