RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 EPM2AIP1Q7L775 607 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-218ENST00000482171 NIPA1Q7RTP0 329 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 PLEKHH3Q7Z736 793 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 HIPK4Q8NE63 616 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 ZBTB10Q96DT7 871 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 DDX27Q96GQ7 796 aaKnown RBP11.9□□□□□ -0.5
SMPD4-218ENST00000482171 GTF3C4Q9UKN8 822 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 KLRG2A4D1S0 409 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-218ENST00000482171 RASSF10A6NK89 507 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 RPS6KA5O75582 802 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 ARSEP51690 589 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 SLC30A9Q6PML9 568 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 LRRC34Q8IZ02 419 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 ATP8B4Q8TF62 1192 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 SENP7Q9BQF6 1050 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 OSBPL8Q9BZF1 889 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 CASZ1Q86V15 1759 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 DCTN3O75935 186 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 GJB1P08034 283 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 RANBP1P43487 201 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 SNRPFP62306 86 aaKnown RBP11.9□□□□□ -0.5
SMPD4-218ENST00000482171 PPATQ06203 517 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 SPARCL1Q14515 664 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 LONRF1Q17RB8 773 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 AIPL1Q9NZN9 384 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
SMPD4-218ENST00000482171 TGFB1I1O43294 461 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 MMP14P50281 582 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 OAZ1P54368 228 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ERVK-9P63128 1117 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 SLC29A2Q14542 456 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 PAN2Q504Q3 1202 aaKnown RBP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 AGBL2Q5U5Z8 902 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ACAD10Q6JQN1 1059 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 JAMLQ86YT9 394 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 SAMD3Q8N6K7 520 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ZFYVE28Q9HCC9 887 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ARL2BPQ9Y2Y0 163 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 L3MBTL1Q9Y468 752 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 SPAG7O75391 227 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 PTGER2P43116 358 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 KCNT1Q5JUK3 1230 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ANO5Q75V66 913 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ZBED8Q8IZ13 594 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 RAET1EQ8TD07 263 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 KCTD10Q9H3F6 313 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 FAM187AA6NFU0 413 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 CCNE2O96020 404 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ADRB2P07550 413 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 STAG3L1P0CL83 205 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 RALAP11233 206 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ITGA4P13612 1032 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 MPZL3Q6UWV2 235 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 NT5C1AQ9BXI3 368 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 TLR10Q9BXR5 811 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 NOL3O60936 208 aaKnown RBP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 MT-ND3P03897 115 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 TGFB3P10600 412 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 CDH8P55286 799 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 PDIA2Q13087 525 aaKnown RBP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 PLCB4Q15147 1175 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 TTMPQ5BVD1 217 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 RNF168Q8IYW5 571 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-218ENST00000482171 DTX3LQ8TDB6 740 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 MAML1Q92585 1016 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ZNF560Q96MR9 790 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 TMBIM4Q9HC24 238 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 ZFP69BQ9UJL9 534 aa11.89□□□□□ -0.51
SMPD4-218ENST00000482171 NUP98P52948 1817 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 GTPBP10A4D1E9 387 aaKnown RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 SETSIPP0DME0 302 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 KRT10P13645 584 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CREG2Q8IUH2 290 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 EMC1Q8N766 993 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 MORC4Q8TE76 937 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CDKL2Q92772 493 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 STAMBPL1Q96FJ0 436 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 SCYL1Q96KG9 808 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 TAS2R14Q9NYV8 317 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 KLHL8Q9P2G9 620 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CFAP69A5D8W1 941 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 GJB6O95452 261 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CCND1P24385 295 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 PRAMEF19Q5SWL8 479 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 ACOT1Q86TX2 421 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 WNK4Q96J92 1243 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 TTC1Q99614 292 aa11.88□□□□□ -0.51
SMPD4-218ENST00000482171 METTL5Q9NRN9 209 aaKnown RBP11.88□□□□□ -0.51
SMPD4-218ENST00000482171 CISHQ9NSE2 258 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms