RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SLC5A9Q2M3M2 681 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 SLC39A12Q504Y0 691 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 POTEHQ6S545 545 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 PARM1Q6UWI2 310 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 RTL10Q7L3V2 364 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 UBALD2Q8IYN6 164 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 THEM5Q8N1Q8 247 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 SLC44A3Q8N4M1 653 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 CXorf38Q8TB03 319 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 TCEAL4Q96EI5 215 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 MCRS1Q96EZ8 462 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF512Q96ME7 567 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF560Q96MR9 790 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 TIGD1Q96MW7 591 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 RTP3Q9BQQ7 232 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 RPP25Q9BUL9 199 aaKnown RBP8.91□□□□□ -0.98
HDAC6-221ENST00000477561 OXCT2Q9BYC2 517 aaPredicted RBP8.91□□□□□ -0.98
HDAC6-221ENST00000477561 CLSTN2Q9H4D0 955 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 KIAA1586Q9HCI6 787 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 CEP72Q9P209 647 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 IGSF9Q9P2J2 1179 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 SIX4Q9UIU6 781 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 ITGA11Q9UKX5 1188 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 DSEQ9UL01 958 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 CDH7Q9ULB5 785 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 MAPK8IP1Q9UQF2 711 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 R3HCC1Q9Y3T6 440 aaKnown RBP8.91□□□□□ -0.98
HDAC6-221ENST00000477561 YIPF1Q9Y548 306 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 SNX9Q9Y5X1 595 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 NUMBLQ9Y6R0 609 aa8.91□□□□□ -0.98
HDAC6-221ENST00000477561 SCN1AP35498 2009 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 TCHHQ07283 1943 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 MTMR11A4FU01 709 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 NRG2O14511 850 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 HCRTO43612 131 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 HUS1O60921 280 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 CFHP08603 1231 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 POU2F2P09086 479 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 MYL4P12829 197 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 GJA1P17302 382 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 CEBPBP17676 345 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 PAX3P23760 479 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 ACAT1P24752 427 aaKnown RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 PNPLA4P41247 253 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 CCR2P41597 374 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 SNRPFP62306 86 aaKnown RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 CYP24A1Q07973 514 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 DPYDQ12882 1025 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 HTR4Q13639 388 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 MYBPC2Q14324 1141 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 IQCEQ6IPM2 695 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 CENPPQ6IPU0 288 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 TRAPPC11Q7Z392 1133 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 LRRTM3Q86VH5 581 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 OSTM1Q86WC4 334 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 WDR49Q8IV35 697 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 SUGP1Q8IWZ8 645 aaKnown RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 NPAS3Q8IXF0 933 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 FMR1NBQ8N0W7 255 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 ELMOD1Q8N336 334 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 PDCL2Q8N4E4 241 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 TTC9BQ8N6N2 239 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 ENGASEQ8NFI3 743 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 FGF14Q92915 247 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 CCDC47Q96A33 483 aaKnown RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 HPDLQ96IR7 371 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 MFSD14AQ96MC6 490 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 FNBP1Q96RU3 617 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 ZCWPW1Q9H0M4 648 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 HOOK1Q9UJC3 728 aaKnown RBP8.9□□□□□ -0.98
HDAC6-221ENST00000477561 L1RE1Q9UN81 338 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 HCN4Q9Y3Q4 1203 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 TECTAO75443 2155 aa8.9□□□□□ -0.98
HDAC6-221ENST00000477561 MYO10Q9HD67 2058 aa8.9□□□□□ -0.99
HDAC6-221ENST00000477561 DOCK6Q96HP0 2047 aa8.9□□□□□ -0.99
HDAC6-221ENST00000477561 SYCE3A1L190 88 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 ANHXE9PGG2 379 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 RHOBTB3O94955 611 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 MYL1P05976 194 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 ALDH1A3P47895 512 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 EPHB3P54753 998 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 MYO1EQ12965 1108 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 PNOCQ13519 176 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 SNW1Q13573 536 aaKnown RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 PSMD6Q15008 389 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 CCDC142Q17RM4 750 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 MGAT5BQ3V5L5 792 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 PRSS36Q5K4E3 855 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 IER5LQ5T953 404 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 CYP4A22Q5TCH4 519 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 LRSAM1Q6UWE0 723 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 PDZD4Q76G19 769 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 BMP8AQ7Z5Y6 402 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 C12orf56Q8IXR9 622 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 SMYD4Q8IYR2 804 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 FBXL6Q8N531 539 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 LRRC52Q8N7C0 313 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms