RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DDX50Q9BQ39 737 aaKnown RBP12.06□□□□□ -0.48
U2AF1-209ENST00000475639 ERP44Q9BS26 406 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 FSD1LQ9BXM9 530 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 KIAA1683Q9H0B3 1180 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 CNOT7Q9UIV1 285 aaKnown RBP12.06□□□□□ -0.48
U2AF1-209ENST00000475639 DCTN4Q9UJW0 460 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 MAGEA13PA6NCF6 341 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 CYTH1Q15438 398 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 DNAJC14Q6Y2X3 702 aaPredicted RBP12.06□□□□□ -0.48
U2AF1-209ENST00000475639 CEP95Q96GE4 821 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 HAPLN3Q96S86 360 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 CYP4F11Q9HBI6 524 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 SELENONQ9NZV5 590 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 GCNT4Q9P109 453 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 PRKAG2Q9UGJ0 569 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 SNX24Q9Y343 169 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 BTNL10A8MVZ5 291 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 UBXN8O00124 270 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 DDAH1O94760 285 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 GUCA1CO95843 209 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 FGFR4P22455 802 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 CD151P48509 253 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 RAD51Q06609 339 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 LAMC2Q13753 1193 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 RWDD4Q6NW29 188 aaKnown RBP12.06□□□□□ -0.48
U2AF1-209ENST00000475639 BARGINQ6ZT62 677 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 EPM2AIP1Q7L775 607 aaPredicted RBP12.06□□□□□ -0.48
U2AF1-209ENST00000475639 TTLL11Q8NHH1 800 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 TMEM109Q9BVC6 243 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 ADNPQ9H2P0 1102 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 CCDC87Q9NVE4 849 aa12.06□□□□□ -0.48
U2AF1-209ENST00000475639 FOXO6A8MYZ6 492 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 FGGP02679 453 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 T-ENOLP0DO92 83 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 ETS2P15036 469 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 BRAFP15056 766 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 VEGFAP15692 232 aaPredicted RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 LSAMPQ13449 338 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 ACVR2BQ13705 512 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 MPP2Q14168 576 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 TMEM35BQ8NCS4 154 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 GRAMD1AQ96CP6 724 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 TGS1Q96RS0 853 aaKnown RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 PDP2Q9P2J9 529 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 DIS3Q9Y2L1 958 aaKnown RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 GMEB1Q9Y692 573 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 PCDH11YQ9BZA8 1340 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 E5RI56 91 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 ECE2O60344 883 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 CD58P19256 250 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 CCNFP41002 786 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 GIT2Q14161 759 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 SEC23AQ15436 765 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 KIAA1755Q5JYT7 1200 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 PPM1NQ8N819 430 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 SH3TC2Q8TF17 1288 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 RMI1Q9H9A7 625 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 METTL5Q9NRN9 209 aaKnown RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 LNPEPQ9UIQ6 1025 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 TJP1Q07157 1748 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 INPP5AQ14642 412 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 DSTYKQ6XUX3 929 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 ASIC4Q96FT7 647 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 ZFP42Q96MM3 310 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 CHKBQ9Y259 395 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 USP54Q70EL1 1684 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 GSG1L2A8MUP6 293 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 PRKAB2O43741 272 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 PRAMEP78395 509 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 CCDC142Q17RM4 750 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 MFSD5Q6N075 450 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 ANKS3Q6ZW76 656 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 FASTKD5Q7L8L6 764 aaKnown RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 SULF1Q8IWU6 871 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 TPCN2Q8NHX9 752 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 PDCD6IPQ8WUM4 868 aaKnown RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 HEXIM2Q96MH2 286 aaKnown RBP12.05□□□□□ -0.48
U2AF1-209ENST00000475639 SEL1LQ9UBV2 794 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 STXBP5LQ9Y2K9 1186 aa12.05□□□□□ -0.48
U2AF1-209ENST00000475639 PSMA2P25787 234 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 PTENP60484 403 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 MTFR1Q15390 333 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 CNGA3Q16281 694 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 LRRC8EQ6NSJ5 796 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 NLRP9Q7RTR0 991 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 PBXIP1Q96AQ6 731 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 LBHD1Q9BQE6 289 aaPredicted RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ZNF577Q9BSK1 485 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 MAF1Q9H063 256 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 WWP1Q9H0M0 922 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ERVK-5Q9HDB9 667 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 H2AFY2Q9P0M6 372 aaPredicted RBP12.04□□□□□ -0.48
U2AF1-209ENST00000475639 ABCB11O95342 1321 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 SYNGAP1Q96PV0 1343 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 RIPK2O43353 540 aa12.04□□□□□ -0.48
U2AF1-209ENST00000475639 UBTFL6P0CB48 400 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms