RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 STK33Q9BYT3 514 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 MIR1-1HGQ9H1L0 117 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 MLXIPQ9HAP2 919 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 TMOD4Q9NZQ9 345 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CALCOCO1Q9P1Z2 691 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 DIS3Q9Y2L1 958 aaKnown RBP6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 CAPN6Q9Y6Q1 641 aa6.35□□□□□ -1.39
ATPAF1-204ENST00000474020 A0A0A6YYK5 440 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 GOLGA6L10A0A0M3HER8 536 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 A6NNZ2 444 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 TMCO5BA8MYB1 307 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 C19orf81C9J6K1 198 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 DDX39AO00148 427 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 CLIC2O15247 247 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 MAPK13O15264 365 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 BUB1O43683 1085 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 SRGAP2O75044 1071 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 HIP1RO75146 1068 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 PALMO75781 387 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 STAM2O75886 525 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 AKAP3O75969 853 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 NOL4O94818 638 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 ERLIN2O94905 339 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 CLSTN1O94985 981 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 PAPLNO95428 1278 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 IVLP07476 585 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 MYCLP12524 364 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 TNFAIP3P21580 790 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 TNFRSF8P28908 595 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 NMT1P30419 496 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 GRK4P32298 578 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 SOX5P35711 763 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 MATR3P43243 847 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 FMO5P49326 533 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 CLCN7P51798 805 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 CASP5P51878 434 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 OAZ1P54368 228 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 NPEPPSP55786 919 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 ZNF280AP59817 542 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 UBXN2AP68543 259 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 GHRHRQ02643 423 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 C2orf54Q08AI8 447 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 BFSP1Q12934 665 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 DMP1Q13316 513 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 RRP1BQ14684 758 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 ASTE1Q2TB18 679 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 TUBB8Q3ZCM7 444 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 NFRKBQ6P4R8 1299 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 ALKBH5Q6P6C2 394 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 EMBQ6PCB8 327 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 C22orf34Q6ZV56 151 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 PEX26Q7Z412 305 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 C12orf56Q8IXR9 622 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 SCYL3Q8IZE3 742 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 XXYLT1Q8NBI6 393 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 NOA1Q8NC60 698 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 SPATA4Q8NEY3 305 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 CYP2W1Q8TAV3 490 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 KIFAP3Q92845 792 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 GPRASP2Q96D09 838 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 IFT74Q96LB3 600 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 PNKPQ96T60 521 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 RMDN3Q96TC7 470 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 MIPEPQ99797 713 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 FGFBP2Q9BYJ0 223 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 INTS2Q9H0H0 1204 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 EPC1Q9H2F5 836 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 C17orf75Q9HAS0 396 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 SLC38A10Q9HBR0 1119 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 AGO4Q9HCK5 861 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 AGPAT3Q9NRZ7 376 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 KCNH7Q9NS40 1196 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 HOMER2Q9NSB8 354 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 ANKEF1Q9NU02 776 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 SEPT11Q9NVA2 429 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 PSD3Q9NYI0 1048 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 VPS18Q9P253 973 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 ADAMTS1Q9UHI8 967 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 DNAJC12Q9UKB3 198 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 L1RE1Q9UN81 338 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 UBIAD1Q9Y5Z9 338 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 SCN9AQ15858 1988 aa6.34□□□□□ -1.39
ATPAF1-204ENST00000474020 PSME4Q14997 1843 aa6.34□□□□□ -1.4
ATPAF1-204ENST00000474020 PFASO15067 1338 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 A0A087X0T9 212 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 GOLGA6BA6NDN3 693 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 GOLGA6L10A6NI86 522 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RSPH10B2B2RC85 870 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 GOLGA8KD6RF30 607 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CCDC188H7C350 402 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 PGRMC1O00264 195 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 WNT10BO00744 389 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ZNF263O14978 683 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CST3P01034 146 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RNASE1P07998 156 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 CTSHP09668 335 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 FAM228BP0C875 321 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 RSPH10BP0C881 870 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 ARP10275 920 aa6.33□□□□□ -1.4
ATPAF1-204ENST00000474020 TFE3P19532 575 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms