RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 PBKQ96KB5 322 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 CCDC114Q96M63 670 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 CLIC6Q96NY7 704 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 NAP1L3Q99457 506 aaPredicted RBP5.3□□□□□ -1.56
LRCH3-214ENST00000473177 TSG101Q99816 390 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 SLF1Q9BQI6 1058 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 LZTS2Q9BRK4 669 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 RAB34Q9BZG1 259 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 CSRNP2Q9H175 543 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 LY9Q9HBG7 655 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 TXNRD2Q9NNW7 524 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 CABP5Q9NP86 173 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 INTS13Q9NVM9 706 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 PRR13Q9NZ81 148 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 ZC3H7BQ9UGR2 993 aaKnown RBP5.3□□□□□ -1.56
LRCH3-214ENST00000473177 PLAGL2Q9UPG8 496 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 DIS3Q9Y2L1 958 aaKnown RBP5.3□□□□□ -1.56
LRCH3-214ENST00000473177 ST14Q9Y5Y6 855 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 TAF6LQ9Y6J9 622 aa5.3□□□□□ -1.56
LRCH3-214ENST00000473177 ATRNL1Q5VV63 1379 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 SSU72P8A0A1W2PR75 194 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 GMNCA6NCL1 334 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CFAP73A6NFT4 308 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 SLC15A5A6NIM6 579 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 B2RBV5 119 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CCDC188H7C350 402 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 RBAK-RBAKDNI3L0D1 243 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 LUC7L3O95232 432 aaKnown RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 GJB6O95452 261 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 FAM107AO95990 144 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 TP53P04637 393 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 PARP1P09874 1014 aaKnown RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 GHRP10912 638 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 SRFP11831 508 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CYBAP13498 195 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ALADP13716 330 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ITIH2P19823 946 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 GRIK1P39086 918 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 STAT6P42226 847 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 AFMP43652 599 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 MTIF2P46199 727 aaKnown RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ZNF143P52747 638 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ANTXR2P58335 489 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 HAND2P61296 217 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 IRX1P78414 480 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ATP2C1P98194 919 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ACTN3Q08043 901 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 LRRC41Q15345 812 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 PUM3Q15397 648 aaKnown RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 NTRK3Q16288 839 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 MSMPQ1L6U9 139 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CCDC40Q4G0X9 1142 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ODF2Q5BJF6 829 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 EPHA10Q5JZY3 1008 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 TTC38Q5R3I4 469 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 TMEM240Q5SV17 173 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CEP85LQ5SZL2 805 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 RNF187Q5TA31 235 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 GKAP1Q5VSY0 366 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CRELD2Q6UXH1 353 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 MAATS1Q7Z4T9 603 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 RNF180Q86T96 592 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 DPP9Q86TI2 863 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 VPS36Q86VN1 386 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 HOOK3Q86VS8 718 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 SYCE1Q8N0S2 351 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 TMEM199Q8N511 208 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 KLHDC4Q8TBB5 520 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 LPIN2Q92539 896 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ERGIC2Q96RQ1 377 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 STRBPQ96SI9 672 aaKnown RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 IFIH1Q9BYX4 1025 aaKnown RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 GPR62Q9BZJ7 368 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 FAM129AQ9BZQ8 928 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 NSRP1Q9H0G5 558 aaKnown RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 KLHL25Q9H0H3 589 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CCDC113Q9H0I3 377 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 OSBPL2Q9H1P3 480 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 VPS16Q9H269 839 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 KAT14Q9H8E8 782 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 NHEJ1Q9H9Q4 299 aaPredicted RBP5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ZNF287Q9HBT7 754 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 RIC8AQ9NPQ8 531 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 XPNPEP3Q9NQH7 507 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 FLRT1Q9NZU1 646 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ZSWIM5Q9P217 1185 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 LCMT1Q9UIC8 334 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 ANAPC4Q9UJX5 808 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CTNND2Q9UQB3 1225 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 DAAM1Q9Y4D1 1078 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 PCDHB12Q9Y5F1 795 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 SNX11Q9Y5W9 270 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 CAPN7Q9Y6W3 813 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 PRUNE2Q8WUY3 3088 aa5.29□□□□□ -1.56
LRCH3-214ENST00000473177 MUC3AQ02505 3323 aa5.28□□□□□ -1.56
LRCH3-214ENST00000473177 MROH7-TTC4A0A0A0MT08 1334 aa5.28□□□□□ -1.56
LRCH3-214ENST00000473177 ATP8B3O60423 1300 aa5.28□□□□□ -1.56
LRCH3-214ENST00000473177 PDS5AQ29RF7 1337 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms