RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ETNPPLQ8TBG4 499 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 CCDC77Q9BR77 488 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MAF1Q9H063 256 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 TMEM117Q9H0C3 514 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ZNF277Q9NRM2 450 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 MTMR4Q9NYA4 1195 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 USTQ9Y2C2 406 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 NEU2Q9Y3R4 380 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 UMODL1Q5DID0 1318 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 FCHO1O14526 889 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 SORBS3O60504 671 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 KITP10721 976 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MYL2P10916 166 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 RPA1P27694 616 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 CDK7P50613 346 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ARFIP2P53365 341 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 HADHBP55084 474 aaKnown RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 ARL4CP56559 192 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 UBXN2AP68543 259 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
TPM3-215ENST00000469717 SFT2D3Q587I9 215 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 LENG9Q96B70 501 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 FIZ1Q96SL8 496 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 RTFDC1Q9BY42 306 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 SHCBP1LQ9BZQ2 653 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ANKFY1Q9P2R3 1169 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 WRAP73Q9P2S5 460 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 TCP10L2B9ZVM9 353 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 PFDN1O60925 122 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 BGNP21810 368 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 TAS2R40P59535 323 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ARHGAP4P98171 946 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 DSG1Q02413 1049 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 DLG1Q12959 904 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 FYB2Q5VWT5 728 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MARK2Q7KZI7 788 aaKnown RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 MYLK4Q86YV6 388 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 CPA5Q8WXQ8 436 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 TTC17Q96AE7 1141 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 CBWD1Q9BRT8 395 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MECRQ9BV79 373 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 FRMD4BQ9Y2L6 1034 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 PRPF4O43172 522 aaKnown RBP eCLIP8.37□□□□□ -1.07
TPM3-215ENST00000469717 MAPK4P31152 587 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 ZNF543Q08ER8 600 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 TFDP1Q14186 410 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 BMT2Q1RMZ1 405 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 DUS1LQ6P1R4 473 aaKnown RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 NIM1KQ8IY84 436 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 NAT14Q8WUY8 206 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 SEMA4DQ92854 862 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 EIF2AK1Q9BQI3 630 aaKnown RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 RMI1Q9H9A7 625 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 SAR1AQ9NR31 198 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 PCDHA1Q9Y5I3 950 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 HEMK1Q9Y5R4 338 aaPredicted RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 TXNDC9O14530 226 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 TROVE2P10155 538 aaKnown RBP eCLIP8.37□□□□□ -1.07
TPM3-215ENST00000469717 RARBP10826 455 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 VAV1P15498 845 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 NRLP54845 237 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 QRICH1Q2TAL8 776 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 HSF5Q4G112 596 aaPredicted RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 ODR4Q5SWX8 454 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 C1orf220Q5T0J3 134 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 PRR5LQ6MZQ0 368 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 APLFQ8IW19 511 aaPredicted RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 GSTCDQ8NEC7 633 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 SKA1Q96BD8 255 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 HAPLN3Q96S86 360 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 PDGFDQ9GZP0 370 aaPredicted RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 TOPORSQ9NS56 1045 aaPredicted RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 SLC7A8Q9UHI5 535 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 DNPEPQ9ULA0 475 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 ACTL7BQ9Y614 415 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 CCDC195A0A1B0GUA6 201 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 MSH4O15457 936 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 IFNB1P01574 187 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 CYP3A4P08684 503 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 BCRP11274 1271 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 PAX3P23760 479 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 ADSSP30520 456 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 AQP4P55087 323 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 NCOA4Q13772 614 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 MSS51Q4VC12 460 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 CEP128Q6ZU80 1094 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 FAM178BQ8IXR5 827 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 NCSTNQ92542 709 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 SLCO2A1Q92959 643 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 CCDC124Q96CT7 223 aaKnown RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 FAM111AQ96PZ2 611 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 TSSK1BQ9BXA7 367 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 FAM192AQ9GZU8 254 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 RANBP17Q9H2T7 1088 aaKnown RBP8.37□□□□□ -1.07
TPM3-215ENST00000469717 VCX3BQ9H321 246 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 SMYD3Q9H7B4 428 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 MANSC1Q9H8J5 431 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 VCX3AQ9NNX9 186 aa8.37□□□□□ -1.07
TPM3-215ENST00000469717 SAE1Q9UBE0 346 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms