RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 NR1H4Q96RI1 486 aaPredicted RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 C10orf88Q9H8K7 445 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 ARHGEF4Q9NR80 690 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 SENP1Q9P0U3 644 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 ATXN10Q9UBB4 475 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 PHF24Q9UPV7 400 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 DNALI1O14645 258 aaPredicted RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 TBX3O15119 743 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 TM4SF1P30408 202 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 RASA2Q15283 850 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 SPDYAQ5MJ70 313 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 SLC10A5Q5PT55 438 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 SESTD1Q86VW0 696 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 PI4K2AQ9BTU6 479 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 DNAAF2Q9NVR5 837 aaKnown RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 CLIC5Q9NZA1 410 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 E5RJQ4 531 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 DDX39AO00148 427 aaKnown RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 KCNQ2O43526 872 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 GPX6P59796 221 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 GABPAQ06546 454 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 SLC15A2Q16348 729 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 TDRPQ86YL5 185 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 TREML1Q86YW5 311 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 RELL1Q8IUW5 271 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 PASD1Q8IV76 773 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 RBM15BQ8NDT2 890 aaKnown RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 OXNAD1Q96HP4 312 aaPredicted RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 CD209Q9NNX6 404 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 PKD2L1Q9P0L9 805 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 LARSQ9P2J5 1176 aaKnown RBP14.7□□□□□ -0.06
VPS52-212ENST00000445902 SERPINB13Q9UIV8 391 aa14.7□□□□□ -0.06
VPS52-212ENST00000445902 STK10O94804 968 aaKnown RBP14.69□□□□□ -0.06
VPS52-212ENST00000445902 ADRB2P07550 413 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 HARSP12081 509 aaKnown RBP14.69□□□□□ -0.06
VPS52-212ENST00000445902 GRIA2P42262 883 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 MFAP3P55082 362 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 AP3B2Q13367 1082 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 C1orf146Q5VVC0 180 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 MARK2Q7KZI7 788 aaKnown RBP14.69□□□□□ -0.06
VPS52-212ENST00000445902 SATL1Q86VE3 508 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 SHC3Q92529 594 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 FAM111AQ96PZ2 611 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 DDX43Q9NXZ2 648 aaKnown RBP14.69□□□□□ -0.06
VPS52-212ENST00000445902 PLIN4Q96Q06 1357 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 MEI4A8MW99 385 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 C6orf229H3BNL8 230 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 TCF4P15884 667 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 SHMT1P34896 483 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 SLC18A1P54219 525 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 GEMIN4P57678 1058 aaKnown RBP14.69□□□□□ -0.06
VPS52-212ENST00000445902 PLCB3Q01970 1234 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 MOXD1Q6UVY6 613 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 SCUBE1Q8IWY4 988 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 ARHGAP18Q8N392 663 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 LINC00116Q8NCU8 138 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 CCDC110Q8TBZ0 833 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 ZNF398Q8TD17 642 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 HIC2Q96JB3 615 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 PAFAH2Q99487 392 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 WDR18Q9BV38 432 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 PHACTR1Q9C0D0 580 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 HSPBP1Q9NZL4 362 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 MARCOQ9UEW3 520 aaPredicted RBP14.69□□□□□ -0.06
VPS52-212ENST00000445902 DAGLAQ9Y4D2 1042 aa14.69□□□□□ -0.06
VPS52-212ENST00000445902 GRIN3BO60391 1043 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 UFL1O94874 794 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 CYP3A4P08684 503 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 DLDP09622 509 aaKnown RBP14.68□□□□□ -0.06
VPS52-212ENST00000445902 KITP10721 976 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 SREBF1P36956 1147 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 LSAMPQ13449 338 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 CLEC16AQ2KHT3 1053 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.68□□□□□ -0.06
VPS52-212ENST00000445902 OTOP1Q7RTM1 612 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 SPATA24Q86W54 205 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 CBWD2Q8IUF1 395 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 ST13P4Q8IZP2 240 aaPredicted RBP14.68□□□□□ -0.06
VPS52-212ENST00000445902 DAW1Q8N136 415 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 PYDC1Q8WXC3 89 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 DDX1Q92499 740 aaKnown RBP14.68□□□□□ -0.06
VPS52-212ENST00000445902 PPARGC1AQ9UBK2 798 aaKnown RBP14.68□□□□□ -0.06
VPS52-212ENST00000445902 PGM3O95394 542 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 SLC1A1P43005 524 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 LPCAT4Q643R3 524 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 OLFML2BQ68BL8 750 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 NAT14Q8WUY8 206 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 MPP4Q96JB8 637 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 C11orf70Q9BRQ4 267 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 TMEM121Q9BTD3 319 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 ZNF395Q9H8N7 513 aaPredicted RBP14.68□□□□□ -0.06
VPS52-212ENST00000445902 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
VPS52-212ENST00000445902 CLUHO75153 1309 aa14.68□□□□□ -0.06
VPS52-212ENST00000445902 TXNDC9O14530 226 aa14.67□□□□□ -0.06
VPS52-212ENST00000445902 CIB2O75838 187 aa14.67□□□□□ -0.06
VPS52-212ENST00000445902 GLRA2P23416 452 aa14.67□□□□□ -0.06
VPS52-212ENST00000445902 MSS51Q4VC12 460 aa14.67□□□□□ -0.06
VPS52-212ENST00000445902 RASSF3Q86WH2 238 aa14.67□□□□□ -0.06
VPS52-212ENST00000445902 MCOLN2Q8IZK6 566 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms