RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 GLIS3Q8NEA6 775 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 ZSCAN18Q8TBC5 510 aaPredicted RBP22.25■■□□□ 1.15
LMBR1-203ENST00000414218 HPS3Q969F9 1004 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 DHX58Q96C10 678 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 TRMT61BQ9BVS5 477 aaKnown RBP22.25■■□□□ 1.15
LMBR1-203ENST00000414218 TNMDQ9H2S6 317 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 SLITRK6Q9H5Y7 841 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 BRD9Q9H8M2 597 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 HEBP1Q9NRV9 189 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 KBTBD4Q9NVX7 518 aa22.25■■□□□ 1.15
LMBR1-203ENST00000414218 RBAKQ9NYW8 714 aaPredicted RBP22.25■■□□□ 1.15
LMBR1-203ENST00000414218 A0A1W2PRU2 124 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 EXTL3O43909 919 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 CUTAO60888 179 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 HSP90AA1P07900 732 aaKnown RBP22.24■■□□□ 1.15
LMBR1-203ENST00000414218 SHC4Q6S5L8 630 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 DNAJB7Q7Z6W7 309 aaPredicted RBP22.24■■□□□ 1.15
LMBR1-203ENST00000414218 C1orf210Q8IVY1 113 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 NKD2Q969F2 451 aaPredicted RBP22.24■■□□□ 1.15
LMBR1-203ENST00000414218 LRRC27Q9C0I9 530 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 TMEM206Q9H813 350 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 LTB4R2Q9NPC1 389 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 AGAP1Q9UPQ3 857 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 ASB3Q9Y575 518 aa22.24■■□□□ 1.15
LMBR1-203ENST00000414218 ITGB3P05106 788 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 ZSCAN22P10073 491 aaPredicted RBP22.23■■□□□ 1.15
LMBR1-203ENST00000414218 POLR2BP30876 1174 aaKnown RBP22.23■■□□□ 1.15
LMBR1-203ENST00000414218 SCARA3Q6AZY7 606 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 LRRTM3Q86VH5 581 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 C1orf127Q8N9H9 656 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 CACTINQ8WUQ7 758 aaKnown RBP22.23■■□□□ 1.15
LMBR1-203ENST00000414218 PSMG2Q969U7 264 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 FAM84AQ96KN4 292 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 ZNF560Q96MR9 790 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 SEPT5Q99719 369 aaPredicted RBP22.23■■□□□ 1.15
LMBR1-203ENST00000414218 TRIM9Q9C026 710 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 GPR88Q9GZN0 384 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 CUEDC2Q9H467 287 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 TRPV4Q9HBA0 871 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 PDE11AQ9HCR9 933 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 ZNF334Q9HCZ1 680 aaPredicted RBP22.23■■□□□ 1.15
LMBR1-203ENST00000414218 HSFX1Q9UBD0 423 aa22.23■■□□□ 1.15
LMBR1-203ENST00000414218 PSMC3P17980 439 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 GDI1P31150 447 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 PNPLA4P41247 253 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 TUFMP49411 452 aaKnown RBP22.22■■□□□ 1.15
LMBR1-203ENST00000414218 AMPD3Q01432 767 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 MGAT5BQ3V5L5 792 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 STXBP4Q6ZWJ1 553 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 GPIHBP1Q8IV16 184 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 CSGALNACT2Q8N6G5 542 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 IQUBQ8NA54 791 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 FAM200AQ8TCP9 573 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 DNASE1L2Q92874 299 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 LPIN3Q9BQK8 851 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 BCO2Q9BYV7 579 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 OSBPL6Q9BZF3 934 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 NCANO14594 1321 aa22.22■■□□□ 1.15
LMBR1-203ENST00000414218 CACNA1IQ9P0X4 2223 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 HEPACAM2A8MVW5 462 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 F13A1P00488 732 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 SP9P0CG40 484 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 TARSP26639 723 aaKnown RBP22.21■■□□□ 1.15
LMBR1-203ENST00000414218 ASIC1P78348 528 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 STXBP5Q5T5C0 1151 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 ZNF852Q6ZMS4 543 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 GAREM2Q75VX8 874 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 ITIH5Q86UX2 942 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 GPD1LQ8N335 351 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 SPRYD3Q8NCJ5 442 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 R4GN57 208 aa22.21■■□□□ 1.15
LMBR1-203ENST00000414218 VPS13AQ96RL7 3174 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 MYO15AQ9UKN7 3530 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 SHISA7A6NL88 538 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 HOXD13P35453 343 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 BFSP1Q12934 665 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 MFSD6LQ8IWD5 586 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 DCP1BQ8IZD4 617 aaKnown RBP22.2■■□□□ 1.14
LMBR1-203ENST00000414218 PDCL2Q8N4E4 241 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 CXorf38Q8TB03 319 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 GIPC2Q8TF65 315 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 DEPDC1BQ8WUY9 529 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 IRF7Q92985 503 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 RSPRY1Q96DX4 576 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 NELL2Q99435 816 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 ATXN3LQ9H3M9 355 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 SPATA6Q9NWH7 488 aaPredicted RBP22.2■■□□□ 1.14
LMBR1-203ENST00000414218 ABI2Q9NYB9 513 aaPredicted RBP22.2■■□□□ 1.14
LMBR1-203ENST00000414218 ITGA11Q9UKX5 1188 aa22.2■■□□□ 1.14
LMBR1-203ENST00000414218 TICRRQ7Z2Z1 1910 aa22.19■■□□□ 1.14
LMBR1-203ENST00000414218 ZNF263O14978 683 aa22.19■■□□□ 1.14
LMBR1-203ENST00000414218 POLR2DO15514 142 aaKnown RBP22.19■■□□□ 1.14
LMBR1-203ENST00000414218 FGF19O95750 216 aa22.19■■□□□ 1.14
LMBR1-203ENST00000414218 KRT19P08727 400 aa22.19■■□□□ 1.14
LMBR1-203ENST00000414218 HAPLN1P10915 354 aaPredicted RBP22.19■■□□□ 1.14
LMBR1-203ENST00000414218 PDIA4P13667 645 aaKnown RBP22.19■■□□□ 1.14
LMBR1-203ENST00000414218 ATF6P18850 670 aa22.19■■□□□ 1.14
LMBR1-203ENST00000414218 GABRR2P28476 465 aa22.19■■□□□ 1.14
LMBR1-203ENST00000414218 SMARCB1Q12824 385 aa22.19■■□□□ 1.14
LMBR1-203ENST00000414218 VEPH1Q14D04 833 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms