RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CAMKK1Q8N5S9 505 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 LPIN3Q9BQK8 851 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 ADAM33Q9BZ11 813 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 ARHGAP28Q9P2N2 729 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 KIAA1024Q9UPX6 916 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 ZZEF1O43149 2961 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 ASPMQ8IZT6 3477 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 ATG2BQ96BY7 2078 aa18.16■□□□□ 0.5
CHMP3-203ENST00000409225 SPEGQ15772 3267 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 EPB41L2O43491 1005 aaKnown RBP18.15■□□□□ 0.5
CHMP3-203ENST00000409225 HIP1RO75146 1068 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 RHOBTB1O94844 696 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 MUTP22033 750 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 WEE1P30291 646 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 CDR1P51861 262 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 NOLC1Q14978 699 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHMP3-203ENST00000409225 DAB2IPQ5VWQ8 1189 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 TRIM68Q6AZZ1 485 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 OVOS1Q6IE37 1185 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 DAW1Q8N136 415 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 GCNAQ96QF7 691 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 TMEM121BQ9BXQ6 578 aaPredicted RBP18.15■□□□□ 0.5
CHMP3-203ENST00000409225 EBF3Q9H4W6 596 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 HPS4Q9NQG7 708 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 WASF3Q9UPY6 502 aa18.15■□□□□ 0.5
CHMP3-203ENST00000409225 LAMA1P25391 3075 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 BCLAF3A2AJT9 711 aaKnown RBP18.14■□□□□ 0.49
CHMP3-203ENST00000409225 TRDMT1O14717 391 aaKnown RBP18.14■□□□□ 0.49
CHMP3-203ENST00000409225 SLC16A4O15374 487 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 CXCL8P10145 99 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 GUCY2FP51841 1108 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 RUNX3Q13761 415 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 MYBPC2Q14324 1141 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 CHFRQ96EP1 664 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 KIF12Q96FN5 646 aa18.14■□□□□ 0.49
CHMP3-203ENST00000409225 SEPT5Q99719 369 aaPredicted RBP18.14■□□□□ 0.49
CHMP3-203ENST00000409225 DDX19AQ9NUU7 478 aaKnown RBP18.14■□□□□ 0.49
CHMP3-203ENST00000409225 LNP1A1A4G5 178 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 TMEM8BA6NDV4 472 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 OTOL1A6NHN0 477 aaPredicted RBP18.13■□□□□ 0.49
CHMP3-203ENST00000409225 SRRM3A6NNA2 597 aaPredicted RBP18.13■□□□□ 0.49
CHMP3-203ENST00000409225 JAK2O60674 1132 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 LARGE1O95461 756 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 CDC25CP30307 473 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 LRPAP1P30533 357 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 GBP1P32455 592 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 AARSP49588 968 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHMP3-203ENST00000409225 ARMCX5Q6P1M9 558 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 NSUN7Q8NE18 718 aaKnown RBP18.13■□□□□ 0.49
CHMP3-203ENST00000409225 FAM83CQ9BQN1 747 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 SCNM1Q9BWG6 230 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 SLC46A2Q9BY10 475 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 FBRSL1Q9HCM7 1045 aaKnown RBP18.13■□□□□ 0.49
CHMP3-203ENST00000409225 INVSQ9Y283 1065 aa18.13■□□□□ 0.49
CHMP3-203ENST00000409225 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
CHMP3-203ENST00000409225 E9PMD0 336 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 TOM1L1O75674 476 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 ARSAP15289 507 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 TYMPP19971 482 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 U2AF2P26368 475 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHMP3-203ENST00000409225 MATR3P43243 847 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHMP3-203ENST00000409225 GUCY1B3Q02153 619 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 STRN3Q13033 797 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 VEPH1Q14D04 833 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 KARSQ15046 597 aaKnown RBP18.12■□□□□ 0.49
CHMP3-203ENST00000409225 TAF12Q16514 161 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 NAIF1Q69YI7 327 aaPredicted RBP18.12■□□□□ 0.49
CHMP3-203ENST00000409225 CMTM8Q8IZV2 173 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 RPLP0P6Q8NHW5 317 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 GATA6Q92908 595 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 GTF3C6Q969F1 213 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 DRC1Q96MC2 740 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 RUSC1Q9BVN2 902 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 IL21Q9HBE4 155 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 LRWD1Q9UFC0 647 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 UBQLN1Q9UMX0 589 aaKnown RBP18.12■□□□□ 0.49
CHMP3-203ENST00000409225 CCL26Q9Y258 94 aa18.12■□□□□ 0.49
CHMP3-203ENST00000409225 SFI1A8K8P3 1242 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 PPEF2O14830 753 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 APBB3O95704 486 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 ATF6P18850 670 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 GALK1P51570 392 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 MAPK7Q13164 816 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 ME3Q16798 604 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 MGAT5BQ3V5L5 792 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 SLC39A12Q504Y0 691 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 KIAA1211LQ6NV74 962 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 SNX29Q8TEQ0 813 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 GIPC2Q8TF65 315 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 ZCCHC14Q8WYQ9 949 aaKnown RBP18.11■□□□□ 0.49
CHMP3-203ENST00000409225 TMEM9BQ9NQ34 198 aa18.11■□□□□ 0.49
CHMP3-203ENST00000409225 KHNYNO15037 678 aaKnown RBP18.1■□□□□ 0.49
CHMP3-203ENST00000409225 CLDN3O15551 220 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 ODC1P11926 461 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 CEACAM1P13688 526 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 CYP3A5P20815 502 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 DRD1P21728 446 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 AVPR1AP37288 418 aa18.1■□□□□ 0.49
CHMP3-203ENST00000409225 TUFMP49411 452 aaKnown RBP18.1■□□□□ 0.49
CHMP3-203ENST00000409225 DGKEP52429 567 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms