RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 ABHD10Q9NUJ1 306 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PUF60Q9UHX1 559 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 BECN2A8MW95 431 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 HNRNPA1P09651 372 aaKnown RBP eCLIP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 TMEM253P0C7T8 217 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 DESP17661 470 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 GTF2F1P35269 517 aaKnown RBP eCLIP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 RBP5P82980 135 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 RING1Q06587 406 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 KCNH2Q12809 1159 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 DUOXA2Q1HG44 320 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CBWD6Q4V339 395 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CBWD3Q5JTY5 395 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CBWD5Q5RIA9 395 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PPP1R26Q5T8A7 1209 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 HS2ST1Q7LGA3 356 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 TMTC1Q8IUR5 882 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 TMEM199Q8N511 208 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 KDM1BQ8NB78 822 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SLC35F5Q8WV83 523 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 KHSRPQ92945 711 aaKnown RBP eCLIP3.92□□□□□ -1.784e-7■■■■□ 19.5
FNDC3A-202ENST00000398316 NTAN1Q96AB6 310 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 INSM2Q96T92 566 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 MRPL44Q9H9J2 332 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 OSER1Q9NX31 292 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 MARK1Q9P0L2 795 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ARMCX3Q9UH62 379 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PCDHB2Q9Y5E7 798 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 A0A087WZ62 844 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 NPHP3-ACAD11A0A0J9YXS1 232 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 K7ENM7 598 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PPP1R12AO14974 1030 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SH3BP5O60239 455 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SOX5P35711 763 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 NLRP11P59045 1033 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CDR2Q01850 454 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 STRN3Q13033 797 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ADAM9Q13443 819 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 MAPRE1Q15691 268 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SPDYCQ5MJ68 293 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PHLDB3Q6NSJ2 640 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 VSTM1Q6UX27 236 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 GBP6Q6ZN66 633 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PAQR9Q6ZVX9 377 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SV2AQ7L0J3 742 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PLPP6Q8IY26 295 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF687Q8N1G0 1237 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SEMA4DQ92854 862 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 FAM193BQ96PV7 902 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 FDXACB1Q9BRP7 624 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CBWD1Q9BRT8 395 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 RAB20Q9NX57 234 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 WDR35Q9P2L0 1181 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF212Q9UDV6 495 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 H3BNC9 293 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SOD2P04179 222 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 UCHL3P15374 230 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 NR2F2P24468 414 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CUL2Q13617 745 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 HERC4Q5GLZ8 1057 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF449Q6P9G9 518 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF783Q6ZMS7 281 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CYP4V2Q6ZWL3 525 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 TXLNBQ8N3L3 684 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 DEPTORQ8TB45 409 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PIGOQ8TEQ8 1089 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SCG3Q8WXD2 468 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 FAM161BQ96MY7 647 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 INTS2Q9H0H0 1204 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SETD4Q9NVD3 440 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 FANCLQ9NW38 375 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CLIC5Q9NZA1 410 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 BARX2Q9UMQ3 279 aaPredicted RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 TRIM66O15016 1216 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 GJB5O95377 273 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 VDRP11473 427 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ATP2B1P20020 1258 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ITGB8P26012 769 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 CLCN1P35523 988 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 RAD23BP54727 409 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 INTS6LQ5JSJ4 861 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 PRSS36Q5K4E3 855 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 EEF1DP3Q658K8 133 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ARMCX5Q6P1M9 558 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 RELL1Q8IUW5 271 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 EPS8L1Q8TE68 723 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SUSD6Q92537 303 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 TSPYL1Q9H0U9 437 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 L2HGDHQ9H9P8 463 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 ZDHHC7Q9NXF8 308 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 SNTG2Q9NY99 539 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 FBXO10Q9UK96 956 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 FBXW11Q9UKB1 542 aa3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 REXO2Q9Y3B8 237 aaKnown RBP3.92□□□□□ -1.78
FNDC3A-202ENST00000398316 MYH10P35580 1976 aa3.91□□□□□ -1.78
FNDC3A-202ENST00000398316 MIA3Q5JRA6 1907 aa3.91□□□□□ -1.78
FNDC3A-202ENST00000398316 ARL5CA6NH57 179 aa3.91□□□□□ -1.78
FNDC3A-202ENST00000398316 C19orf67A6NJJ6 358 aa3.91□□□□□ -1.78
FNDC3A-202ENST00000398316 XPO1O14980 1071 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms