RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 EPM2AIP1Q7L775 607 aaPredicted RBP19.14■□□□□ 0.65
HDDC3-201ENST00000330334 DNAJB7Q7Z6W7 309 aaPredicted RBP19.14■□□□□ 0.65
HDDC3-201ENST00000330334 ITIH5Q86UX2 942 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 GPD1LQ8N335 351 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 LRRC52Q8N7C0 313 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 C1orf127Q8N9H9 656 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 ZSWIM2Q8NEG5 633 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 CXorf38Q8TB03 319 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 SPATA18Q8TC71 538 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 DHX58Q96C10 678 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 TMEM209Q96SK2 561 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 KIAA1586Q9HCI6 787 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 ITGA11Q9UKX5 1188 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 SLC27A5Q9Y2P5 690 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 ANK1P16157 1881 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 NRG2O14511 850 aaPredicted RBP19.13■□□□□ 0.65
HDDC3-201ENST00000330334 GFRA3O60609 400 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 DCNP07585 359 aaKnown RBP19.13■□□□□ 0.65
HDDC3-201ENST00000330334 SNRPFP62306 86 aaKnown RBP19.13■□□□□ 0.65
HDDC3-201ENST00000330334 SURF1Q15526 300 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 SHKBP1Q8TBC3 707 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 ZNF507Q8TCN5 953 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 SPPL2BQ8TCT7 592 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 DEPDC1BQ8WUY9 529 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 TRMT61BQ9BVS5 477 aaKnown RBP19.13■□□□□ 0.65
HDDC3-201ENST00000330334 FOXQ1Q9C009 403 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 GDAP2Q9NXN4 497 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 RCOR1Q9UKL0 485 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 MYH15Q9Y2K3 1946 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 SCN1AP35498 2009 aa19.13■□□□□ 0.65
HDDC3-201ENST00000330334 RIF1Q5UIP0 2472 aaKnown RBP19.13■□□□□ 0.65
HDDC3-201ENST00000330334 DMDP11532 3685 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 ZNF233A6NK53 670 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 POLR2DO15514 142 aaKnown RBP19.12■□□□□ 0.65
HDDC3-201ENST00000330334 PSMC3P17980 439 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 WEE1P30291 646 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 POLR2BP30876 1174 aaKnown RBP19.12■□□□□ 0.65
HDDC3-201ENST00000330334 HOXD13P35453 343 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 MAGEA9P43362 315 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 ASIC1P78348 528 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 EHHADHQ08426 723 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 TEAD2Q15562 447 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 SLC39A12Q504Y0 691 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 C1orf210Q8IVY1 113 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 DCP1BQ8IZD4 617 aaKnown RBP19.12■□□□□ 0.65
HDDC3-201ENST00000330334 ZSCAN18Q8TBC5 510 aaPredicted RBP19.12■□□□□ 0.65
HDDC3-201ENST00000330334 IRF7Q92985 503 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 PCIF1Q9H4Z3 704 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 PDE11AQ9HCR9 933 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 FAM13BQ9NYF5 915 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 PCDHA7Q9UN72 937 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 AGAP1Q9UPQ3 857 aa19.12■□□□□ 0.65
HDDC3-201ENST00000330334 PTPRZ1P23471 2315 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-201ENST00000330334 PVALEFA0A1B0GWK0 134 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 GOLGA8IPA6NC78 632 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 GOLGA8JA6NMD2 632 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 ITGB3P05106 788 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 GLULP15104 373 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 ME1P48163 572 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 MLLT6P55198 1093 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-201ENST00000330334 RBP5P82980 135 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 FAM26FQ5R3K3 315 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 FOXD4L5Q5VV16 416 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-201ENST00000330334 RESP18Q5W5W9 173 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 ZNF852Q6ZMS4 543 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 UNC13DQ70J99 1090 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 LRRTM3Q86VH5 581 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 MFSD6LQ8IWD5 586 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 TMEM86AQ8N2M4 240 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 CSGALNACT2Q8N6G5 542 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 TTC9BQ8N6N2 239 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 GLIS3Q8NEA6 775 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 FOXD4L4Q8WXT5 416 aaPredicted RBP19.11■□□□□ 0.65
HDDC3-201ENST00000330334 HPS3Q969F9 1004 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 ACBD6Q9BR61 282 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 SEMA4AQ9H3S1 761 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 BRD9Q9H8M2 597 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 LTB4R2Q9NPC1 389 aa19.11■□□□□ 0.65
HDDC3-201ENST00000330334 MRPS17Q9Y2R5 130 aaKnown RBP19.11■□□□□ 0.65
HDDC3-201ENST00000330334 UBE4BO95155 1302 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 A0A1W2PRU2 124 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 FAM170BA6NMN3 283 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 NCAM2O15394 837 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 HAPLN1P10915 354 aaPredicted RBP19.1■□□□□ 0.65
HDDC3-201ENST00000330334 GJA1P17302 382 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 VEPH1Q14D04 833 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 NFE2Q16621 373 aaPredicted RBP19.1■□□□□ 0.65
HDDC3-201ENST00000330334 VITQ6UXI7 678 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 GAREM2Q75VX8 874 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 DPH6Q7L8W6 267 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 FRMD5Q7Z6J6 570 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 PDCL2Q8N4E4 241 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 TOP6BLQ8N6T0 577 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 LEO1Q8WVC0 666 aaPredicted RBP19.1■□□□□ 0.65
HDDC3-201ENST00000330334 CLDN23Q96B33 292 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 BCO2Q9BYV7 579 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 INTS13Q9NVM9 706 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 CGNQ9P2M7 1197 aaKnown RBP19.1■□□□□ 0.65
HDDC3-201ENST00000330334 SIX4Q9UIU6 781 aa19.1■□□□□ 0.65
HDDC3-201ENST00000330334 ZMYM5Q9UJ78 669 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms