RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 Q6ZNX1 250 aa10.86□□□□□ -0.67
SF3B2-201ENST00000322535 ST13P4Q8IZP2 240 aaPredicted RBP10.86□□□□□ -0.67
SF3B2-201ENST00000322535 TBCKQ8TEA7 893 aa10.86□□□□□ -0.67
SF3B2-201ENST00000322535 WRNIP1Q96S55 665 aa10.86□□□□□ -0.67
SF3B2-201ENST00000322535 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
SF3B2-201ENST00000322535 SLC30A1Q9Y6M5 507 aa10.86□□□□□ -0.67
SF3B2-201ENST00000322535 ATRNL1Q5VV63 1379 aa10.86□□□□□ -0.67
SF3B2-201ENST00000322535 FAM47E-STBD1D6RA91 191 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 PABPC4LP0CB38 370 aaKnown RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 BMP3P12645 472 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 HOXD13P35453 343 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 NOVP48745 357 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 VPS41P49754 854 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 ZNF280AP59817 542 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 RASA2Q15283 850 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 C6orf118Q5T5N4 469 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 ANKRD40Q6AI12 368 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 CGB2Q6NT52 195 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 SLC38A6Q8IZM9 456 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 ARHGAP24Q8N264 748 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 FBXO25Q8TCJ0 367 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 PGM2Q96G03 612 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 PABPC3Q9H361 631 aaKnown RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 PGAP2Q9UHJ9 254 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 HERC5Q9UII4 1024 aaKnown RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 NR2E1Q9Y466 385 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 ANKRD34BA5PLL1 514 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 CDK2AP1O14519 115 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 DDHD2O94830 711 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 TDP2O95551 362 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 AGTP01019 485 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 SH3BGRP55822 239 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 POLR2FP61218 127 aaKnown RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 PFKPQ01813 784 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 SLC34A1Q06495 639 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 SPP2Q13103 211 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 ACSBG2Q5FVE4 666 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 WASHC2DQ5SRD0 308 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 PATL1Q86TB9 770 aaKnown RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 BRSK1Q8TDC3 778 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 MORC4Q8TE76 937 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 P2RX7Q99572 595 aaKnown RBP10.85□□□□□ -0.67
SF3B2-201ENST00000322535 ARMC7Q9H6L4 198 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 NYAP2Q9P242 653 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 CES1P23141 567 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 ETFBP38117 255 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 BTKQ06187 659 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 RALGDSQ12967 914 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 MTMR2Q13614 643 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 METTL13Q8N6R0 699 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 SPOCK2Q92563 424 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 TTC1Q99614 292 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 EPB41L4BQ9H329 900 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 CHKBQ9Y259 395 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 PCDHGA8Q9Y5G5 932 aa10.85□□□□□ -0.67
SF3B2-201ENST00000322535 MATN2O00339 956 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 TXNDC9O14530 226 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 ZBTB5O15062 677 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 XPOTO43592 962 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 ACSL3O95573 720 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 KRT13P13646 458 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 GTF2H1P32780 548 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 GPC3P51654 580 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 KPNA1P52294 538 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 CDR2Q01850 454 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 OCRLQ01968 901 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 DNAJC3Q13217 504 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 GIT2Q14161 759 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 NAB2Q15742 525 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 MIIPQ5JXC2 388 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 SNRNP48Q6IEG0 339 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 LLGL2Q6P1M3 1020 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 VPS36Q86VN1 386 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 REXO1Q8N1G1 1221 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 ZNF280CQ8ND82 737 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 SCFD2Q8WU76 684 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 MCUR1Q96AQ8 359 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 SLC7A6OSQ96CW6 309 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 WNK4Q96J92 1243 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 VPS33BQ9H267 617 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 BHMT2Q9H2M3 363 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 PRR12Q9ULL5 1215 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 HBS1LQ9Y450 684 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 PNMA6FA0A0J9YX94 578 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 RNASEH1O60930 286 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 DNAJC6O75061 913 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 LMNAP02545 664 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 FGGP02679 453 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 CHRNB1P11230 501 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 COL6A1P12109 1028 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 TCEA1P23193 301 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 TSPY1Q01534 308 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 AUHQ13825 339 aaKnown RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 PDE1CQ14123 709 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 EXOC3L4Q17RC7 722 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 TAF1BQ53T94 588 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-201ENST00000322535 PDXDC2PQ6P474 469 aa10.84□□□□□ -0.67
SF3B2-201ENST00000322535 C4orf50Q6ZRC1 276 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms