RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 CACNB2Q08289 660 aaPredicted RBP22.68■■□□□ 1.22
GFRA3-201ENST00000274721 TRIM32Q13049 653 aa22.68■■□□□ 1.22
GFRA3-201ENST00000274721 CXCL17Q6UXB2 119 aa22.68■■□□□ 1.22
GFRA3-201ENST00000274721 GSPT2Q8IYD1 628 aaKnown RBP22.68■■□□□ 1.22
GFRA3-201ENST00000274721 TMEM176AQ96HP8 235 aa22.68■■□□□ 1.22
GFRA3-201ENST00000274721 CELF4Q9BZC1 486 aaKnown RBP22.68■■□□□ 1.22
GFRA3-201ENST00000274721 CENPFP49454 3210 aa22.68■■□□□ 1.22
GFRA3-201ENST00000274721 ADAMTS4O75173 837 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 GUCY2DQ02846 1103 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 PTPN11Q06124 597 aaPredicted RBP22.67■■□□□ 1.22
GFRA3-201ENST00000274721 PPP2R5EQ16537 467 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 NBPF20Q3BBV1 942 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 XKR4Q5GH76 650 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 FEZF2Q8TBJ5 459 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 TRIM6Q9C030 488 aaPredicted RBP22.67■■□□□ 1.22
GFRA3-201ENST00000274721 SPC25Q9HBM1 224 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 EPB41L5Q9HCM4 733 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 HMGXB4Q9UGU5 601 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 BARX2Q9UMQ3 279 aaPredicted RBP22.67■■□□□ 1.22
GFRA3-201ENST00000274721 SCN1AP35498 2009 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 ZSCAN5CA6NGD5 496 aaPredicted RBP22.67■■□□□ 1.22
GFRA3-201ENST00000274721 RECQL4O94761 1208 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 RARBP10826 455 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 HSPA6P17066 643 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 TTC39CQ8N584 583 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 CEP83Q9Y592 693 aa22.67■■□□□ 1.22
GFRA3-201ENST00000274721 CASP8AP2Q9UKL3 1982 aa22.66■■□□□ 1.22
GFRA3-201ENST00000274721 TLR3O15455 904 aaKnown RBP22.66■■□□□ 1.22
GFRA3-201ENST00000274721 CD19P15391 556 aa22.66■■□□□ 1.22
GFRA3-201ENST00000274721 MYO1EQ12965 1108 aa22.66■■□□□ 1.22
GFRA3-201ENST00000274721 DENND1BQ6P3S1 775 aa22.66■■□□□ 1.22
GFRA3-201ENST00000274721 TSPAN18Q96SJ8 248 aa22.66■■□□□ 1.22
GFRA3-201ENST00000274721 VIPAS39Q9H9C1 493 aa22.66■■□□□ 1.22
GFRA3-201ENST00000274721 TMEM191CA6NGB0 347 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 AOC2O75106 756 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 SEL1L2Q5TEA6 688 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 ERICH1Q86X53 443 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 ZDHHC14Q8IZN3 488 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 LRRC52Q8N7C0 313 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 EIF1ADQ8N9N8 165 aaKnown RBP22.65■■□□□ 1.22
GFRA3-201ENST00000274721 ERVK-5Q9HDB9 667 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 AMACRQ9UHK6 382 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 AKAP5P24588 427 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 MAN1A1P33908 653 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 CARSP49589 748 aaKnown RBP22.65■■□□□ 1.22
GFRA3-201ENST00000274721 EPHB4P54760 987 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 SP3Q02447 781 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 PPP1R15BQ5SWA1 713 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 EMBQ6PCB8 327 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 MAATS1Q7Z4T9 603 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 BEST2Q8NFU1 509 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 CCDC26Q8TAB7 109 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 TUBGCP4Q9UGJ1 667 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 CYTH4Q9UIA0 394 aa22.65■■□□□ 1.22
GFRA3-201ENST00000274721 GOLGA6L10A0A0M3HER8 536 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 VDRP11473 427 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 RPL7AP62424 266 aaKnown RBP22.64■■□□□ 1.22
GFRA3-201ENST00000274721 CNGA2Q16280 664 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 GDF6Q6KF10 455 aaPredicted RBP22.64■■□□□ 1.22
GFRA3-201ENST00000274721 FAM228AQ86W67 206 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 REM2Q8IYK8 340 aaPredicted RBP22.64■■□□□ 1.22
GFRA3-201ENST00000274721 CASKIN2Q8WXE0 1202 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 C18orf25Q96B23 403 aaPredicted RBP22.64■■□□□ 1.22
GFRA3-201ENST00000274721 DDX27Q96GQ7 796 aaKnown RBP22.64■■□□□ 1.22
GFRA3-201ENST00000274721 RNF39Q9H2S5 420 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 PLEKHA4Q9H4M7 779 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 RNF186Q9NXI6 227 aa22.64■■□□□ 1.22
GFRA3-201ENST00000274721 UBQLN1Q9UMX0 589 aaKnown RBP22.64■■□□□ 1.22
GFRA3-201ENST00000274721 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.64■■□□□ 1.22
GFRA3-201ENST00000274721 SMIM28A0A1B0GU29 152 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 ESYT3A0FGR9 886 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 PPEF2O14830 753 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 KCNE1P15382 129 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 NDST1P52848 882 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 MRPS6P82932 125 aaKnown RBP22.64■■□□□ 1.21
GFRA3-201ENST00000274721 ORC1Q13415 861 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 SMC1AQ14683 1233 aaKnown RBP22.64■■□□□ 1.21
GFRA3-201ENST00000274721 TRADDQ15628 312 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 RPAINQ86UA6 219 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 SLC13A5Q86YT5 568 aaPredicted RBP22.64■■□□□ 1.21
GFRA3-201ENST00000274721 KLHDC9Q8NEP7 349 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.64■■□□□ 1.21
GFRA3-201ENST00000274721 SEC14L1Q92503 715 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 KIAA1257Q9ULG3 409 aa22.64■■□□□ 1.21
GFRA3-201ENST00000274721 GJB6O95452 261 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 HMGCRP04035 888 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 PTPN20Q4JDL3 420 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 GLRA4Q5JXX5 417 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 CCSAPQ6IQ19 270 aaPredicted RBP22.63■■□□□ 1.21
GFRA3-201ENST00000274721 ADAT2Q7Z6V5 191 aaKnown RBP22.63■■□□□ 1.21
GFRA3-201ENST00000274721 SERINC5Q86VE9 423 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 SESTD1Q86VW0 696 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 PRELID2Q8N945 189 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 SMG8Q8ND04 991 aaKnown RBP22.63■■□□□ 1.21
GFRA3-201ENST00000274721 C3orf20Q8ND61 904 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 CAVIN3Q969G5 261 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 PLVAPQ9BX97 442 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 IP6K2Q9UHH9 426 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 LCMT1Q9UIC8 334 aa22.63■■□□□ 1.21
GFRA3-201ENST00000274721 STRIP2Q9ULQ0 834 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms