RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 BIRC3Q13489 604 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 TRPC3Q13507 836 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 SOWAHAQ2M3V2 549 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 SLC39A12Q504Y0 691 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 COBLL1Q53SF7 1204 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 TDRD10Q5VZ19 366 aaKnown RBP19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 GET4Q7L5D6 327 aaPredicted RBP19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 LRRTM3Q86VH5 581 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 ZDHHC14Q8IZN3 488 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 ADSSL1Q8N142 457 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 TMC2Q8TDI7 906 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 ACSF2Q96CM8 615 aaPredicted RBP19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 MYADMQ96S97 322 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 SLC27A5Q9Y2P5 690 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 PLXNA3P51805 1871 aa19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 PDCD11Q14690 1871 aaKnown RBP19.3■□□□□ 0.68
SNRPA1-201ENST00000254193 MTMR11A4FU01 709 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 BIN1O00499 593 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 C4BPAP04003 597 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 ALADP13716 330 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 GBP2P32456 591 aaPredicted RBP19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 PSMC2P35998 433 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 PMS1P54277 932 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 MYL6P60660 151 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 TWF1Q12792 350 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 CAMK4Q16566 473 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 EDRF1Q3B7T1 1238 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 C1orf220Q5T0J3 134 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 CENPPQ6IPU0 288 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 OSTM1Q86WC4 334 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 FAM186BQ8IYM0 893 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 ADGRF2Q8IZF7 708 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 TMEM86AQ8N2M4 240 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 TOP6BLQ8N6T0 577 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 GTPBP4Q9BZE4 634 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 DDX43Q9NXZ2 648 aaKnown RBP19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 YIPF1Q9Y548 306 aa19.29■□□□□ 0.68
SNRPA1-201ENST00000254193 MAPK13O15264 365 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 HCRTO43612 131 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 ASGR2P07307 311 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 CD44P16070 742 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 BMP6P22004 513 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 ACAT1P24752 427 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 VAMP7P51809 220 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 AP3M2P53677 418 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 PABPC1LQ4VXU2 614 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 ANKRD40Q6AI12 368 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 LIMS2Q7Z4I7 341 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 PLCD3Q8N3E9 789 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 TTC9BQ8N6N2 239 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 MMS19Q96T76 1030 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 XYLT2Q9H1B5 865 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 CEP72Q9P209 647 aa19.28■□□□□ 0.68
SNRPA1-201ENST00000254193 MUC3AQ02505 3323 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 CETN3O15182 167 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 SOAT2O75908 522 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 VNN1O95497 513 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 RHOP08100 348 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 TRIM49P0CI25 452 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 TRIM49CP0CI26 452 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 PTPN2P17706 415 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 TSPY1Q01534 308 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 MORC3Q14149 939 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 WDR72Q3MJ13 1102 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 CLEC17AQ6ZS10 378 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 INTS8Q75QN2 995 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 DCP1BQ8IZD4 617 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 ITFG1Q8TB96 612 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 ELMO3Q96BJ8 720 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 TSG101Q99816 390 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 CORO1BQ9BR76 489 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 TMLHEQ9NVH6 421 aa19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 NXF1Q9UBU9 619 aaKnown RBP19.27■□□□□ 0.68
SNRPA1-201ENST00000254193 ANK1P16157 1881 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 TRIM49BA6NDI0 452 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 GABRDO14764 452 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 IKBKBO14920 756 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 KRT13P13646 458 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 LHX1P48742 406 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 MYL7Q01449 175 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 NCOA4Q13772 614 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 PTPN21Q16825 1174 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 CCDC142Q17RM4 750 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 SV2AQ7L0J3 742 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 DPH6Q7L8W6 267 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 KBTBD7Q8WVZ9 684 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 ACBD6Q9BR61 282 aa19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 MRPL45Q9BRJ2 306 aaKnown RBP19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 ABI2Q9NYB9 513 aaPredicted RBP19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.26■□□□□ 0.67
SNRPA1-201ENST00000254193 C5orf42Q9H799 3197 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 FAM86C2PA6NEL3 165 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 PPP1R3GB7ZBB8 358 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 PSMA7O14818 248 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 CLSTN1O94985 981 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 STAU1O95793 577 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 LAMP2P13473 410 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 LMO2P25791 158 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ATICP31939 592 aa19.25■□□□□ 0.67
SNRPA1-201ENST00000254193 ALDH1A3P47895 512 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms