RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PPEF2O14830 753 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 ITGA4P13612 1032 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 CD19P15391 556 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 CDH5P33151 784 aaPredicted RBP19.3■□□□□ 0.68
VIM-201ENST00000224237 PAFAH1B1P43034 410 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 RAB27AP51159 221 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 DNA2P51530 1060 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 C1QBPQ07021 282 aaKnown RBP19.3■□□□□ 0.68
VIM-201ENST00000224237 LPIN1Q14693 890 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 LIN9Q5TKA1 542 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 SLC4A11Q8NBS3 891 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 TMEM35BQ8NCS4 154 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 TFAP2BQ92481 460 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 HES6Q96HZ4 224 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 ZSWIM1Q9BR11 485 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 PAK6Q9NQU5 681 aaPredicted RBP19.3■□□□□ 0.68
VIM-201ENST00000224237 ADAM22Q9P0K1 906 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 SNX9Q9Y5X1 595 aa19.3■□□□□ 0.68
VIM-201ENST00000224237 SSTR3P32745 418 aaPredicted RBP19.29■□□□□ 0.68
VIM-201ENST00000224237 CFAP221Q4G0U5 840 aa19.29■□□□□ 0.68
VIM-201ENST00000224237 ZNF618Q5T7W0 954 aa19.29■□□□□ 0.68
VIM-201ENST00000224237 PBKQ96KB5 322 aa19.29■□□□□ 0.68
VIM-201ENST00000224237 TWNKQ96RR1 684 aa19.29■□□□□ 0.68
VIM-201ENST00000224237 C11orf70Q9BRQ4 267 aa19.29■□□□□ 0.68
VIM-201ENST00000224237 SEZ6LQ9BYH1 1024 aa19.29■□□□□ 0.68
VIM-201ENST00000224237 HMGXB4Q9UGU5 601 aa19.29■□□□□ 0.68
VIM-201ENST00000224237 PDE2AO00408 941 aaPredicted RBP19.28■□□□□ 0.68
VIM-201ENST00000224237 KCNK3O14649 394 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 PTGESO14684 152 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 RRM1P23921 792 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 ITIH3Q06033 890 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 GPR161Q8N6U8 529 aaKnown RBP19.28■□□□□ 0.68
VIM-201ENST00000224237 PPP1R10Q96QC0 940 aaKnown RBP19.28■□□□□ 0.68
VIM-201ENST00000224237 NT5C1AQ9BXI3 368 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 ELOVL4Q9GZR5 314 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 LHX5Q9H2C1 402 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 SLC38A7Q9NVC3 462 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 CHORDC1Q9UHD1 332 aaPredicted RBP19.28■□□□□ 0.68
VIM-201ENST00000224237 GIT1Q9Y2X7 761 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.28■□□□□ 0.68
VIM-201ENST00000224237 ALG6Q9Y672 507 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 MEIS3P2A8K0S8 358 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 ARVCFO00192 962 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 DNM1LO00429 736 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 CKBP12277 381 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 CCL5P13501 91 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 MMP8P22894 467 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 NDST1P52848 882 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 PTPROQ16827 1216 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 C1orf131Q8NDD1 294 aaKnown RBP19.28■□□□□ 0.68
VIM-201ENST00000224237 ZFP42Q96MM3 310 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 RPS6KC1Q96S38 1066 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 MRPL47Q9HD33 250 aaKnown RBP19.28■□□□□ 0.68
VIM-201ENST00000224237 KIAA1257Q9ULG3 409 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 SCINQ9Y6U3 715 aa19.28■□□□□ 0.68
VIM-201ENST00000224237 ZNF623O75123 536 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 CALB1P05937 261 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 VDRP11473 427 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 LRPAP1P30533 357 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 MLH1P40692 756 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 TAF6P49848 677 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 SOX4Q06945 474 aaPredicted RBP19.27■□□□□ 0.68
VIM-201ENST00000224237 PTP4A2Q12974 167 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 DSC3Q14574 896 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 MESDQ14696 234 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 SV2CQ496J9 727 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 MMS22LQ6ZRQ5 1243 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 MRPL10Q7Z7H8 261 aaKnown RBP19.27■□□□□ 0.68
VIM-201ENST00000224237 SELENOOQ9BVL4 669 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 RNF208Q9H0X6 261 aa19.27■□□□□ 0.68
VIM-201ENST00000224237 MIF4GDA9UHW6 222 aaKnown RBP19.26■□□□□ 0.67
VIM-201ENST00000224237 MGEA5O60502 916 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 SGO2Q562F6 1265 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 GOLGA2P5Q9HBQ8 144 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 GDAP2Q9NXN4 497 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 ANAPC7Q9UJX3 599 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 A0A0U1RQF3 1178 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 KPNA7A9QM74 516 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 SKIP12755 728 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 ORC1Q13415 861 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 C2CD6Q53TS8 623 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 TRAF7Q6Q0C0 670 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 NOA1Q8NC60 698 aaKnown RBP19.26■□□□□ 0.67
VIM-201ENST00000224237 HEXIM2Q96MH2 286 aaKnown RBP19.26■□□□□ 0.67
VIM-201ENST00000224237 GAD1Q99259 594 aa19.26■□□□□ 0.67
VIM-201ENST00000224237 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.26■□□□□ 0.67
VIM-201ENST00000224237 TMEM110-MUSTN1A8MSY1 372 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 THP07101 528 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 IBSPP21815 317 aaPredicted RBP19.25■□□□□ 0.67
VIM-201ENST00000224237 C1QTNF8P60827 252 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 STILQ15468 1287 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 CNGA2Q16280 664 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 PLEKHA7Q6IQ23 1121 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 AGMOQ6ZNB7 445 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 UNC93AQ86WB7 457 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 WDTC1Q8N5D0 677 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 GSTCDQ8NEC7 633 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 SPATA4Q8NEY3 305 aa19.25■□□□□ 0.67
VIM-201ENST00000224237 LPPQ93052 612 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms