RNA–Protein interactions for RNA: YPL273W

SAM4, Transcript of S-adenosylmethionine-homocysteine methyltransferase, yeast

Gene SAM4, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAM4	YPL273W	YHR122W	P38829	231 aa		4.13	□□□□□ -1.75
SAM4	YPL273W	IRC18	P47056	224 aa		4.13	□□□□□ -1.75
SAM4	YPL273W	IMD3	P50095	523 aa	Known RBP	4.13	□□□□□ -1.75
SAM4	YPL273W	CAB4	P53332	305 aa		4.13	□□□□□ -1.75
SAM4	YPL273W	VBA1	Q04301	562 aa		4.13	□□□□□ -1.75
SAM4	YPL273W	SCP1	Q08873	200 aa		4.13	□□□□□ -1.75
SAM4	YPL273W	IES3	Q12345	250 aa		4.13	□□□□□ -1.75
SAM4	YPL273W	DCP1	Q12517	231 aa	Predicted RBP	4.13	□□□□□ -1.75
SAM4	YPL273W	YJR112W-A	Q3E743	109 aa		4.13	□□□□□ -1.75
SAM4	YPL273W	VPS63	O13549	108 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	MIR1	P23641	311 aa	Known RBP	4.12	□□□□□ -1.75
SAM4	YPL273W	COX15	P40086	486 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	SER2	P42941	309 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	AIM25	P47140	327 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	ERG25	P53045	309 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	SMX3	P54999	86 aa	Predicted RBP	4.12	□□□□□ -1.75
SAM4	YPL273W	SYM1	Q06563	197 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	MCM21	Q06675	368 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	PBP4	Q07362	185 aa	Known RBP	4.12	□□□□□ -1.75
SAM4	YPL273W	YOL029C	Q08187	201 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	YNG1	Q08465	219 aa		4.12	□□□□□ -1.75
SAM4	YPL273W	NOP1	P15646	327 aa	Known RBP	4.11	□□□□□ -1.75
SAM4	YPL273W	MRS4	P23500	304 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	CPR4	P25334	318 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	HYM1	P32464	399 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	UTR5	P32630	166 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	MRPL38	P35996	138 aa	Predicted RBP	4.11	□□□□□ -1.75
SAM4	YPL273W	ATP3	P38077	311 aa	Known RBP	4.11	□□□□□ -1.75
SAM4	YPL273W	POP8	P38208	133 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	LAG1	P38703	411 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	COS8	P38723	381 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	LSM1	P47017	172 aa	Known RBP	4.11	□□□□□ -1.75
SAM4	YPL273W	YJR012C	P47087	207 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	DUO1	P53168	247 aa	Known RBP	4.11	□□□□□ -1.75
SAM4	YPL273W	YAP1802	P53309	568 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	YHP1	Q04116	353 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	YOR385W	Q08909	290 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	YPL199C	Q08954	240 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	RKI1	Q12189	258 aa		4.11	□□□□□ -1.75
SAM4	YPL273W	HTZ1	Q12692	134 aa	Known RBP	4.11	□□□□□ -1.75
SAM4	YPL273W	COX2	P00410	251 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	YPS1	P32329	569 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	PAN3	P36102	679 aa	Predicted RBP	4.1	□□□□□ -1.75
SAM4	YPL273W	LSM12	P38828	187 aa	Known RBP	4.1	□□□□□ -1.75
SAM4	YPL273W	MIT1	P40002	666 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	MRPL49	P40858	161 aa	Predicted RBP	4.1	□□□□□ -1.75
SAM4	YPL273W	CRH1	P53301	507 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	YMR181C	Q03231	154 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	THI74	Q04083	370 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	FMP42	Q04991	504 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	RTT103	Q05543	409 aa		4.1	□□□□□ -1.75
SAM4	YPL273W	NGL1	Q08213	363 aa	Known RBP	4.1	□□□□□ -1.75
SAM4	YPL273W	MDN1	Q12019	4910 aa	Known RBP	4.09	□□□□□ -1.75
SAM4	YPL273W	GRX2	P17695	143 aa	Known RBP	4.09	□□□□□ -1.75
SAM4	YPL273W	MDM10	P18409	493 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	ERV1	P27882	189 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	YPT31	P38555	223 aa	Known RBP	4.09	□□□□□ -1.75
SAM4	YPL273W	IPI1	P38803	334 aa	Predicted RBP	4.09	□□□□□ -1.75
SAM4	YPL273W	SYG1	P40528	902 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	LST8	P41318	303 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	GRH1	Q04410	372 aa	Known RBP	4.09	□□□□□ -1.75
SAM4	YPL273W	FSH2	Q05015	223 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	YLR281C	Q05863	155 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	IRC23	Q08416	157 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	ATG31	Q12421	196 aa		4.09	□□□□□ -1.75
SAM4	YPL273W	YCP4	P25349	247 aa	Known RBP	4.08	□□□□□ -1.76
SAM4	YPL273W	SDH4	P37298	181 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	FLO5	P38894	1075 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	GET2	P40056	285 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	YNL194C	P40169	301 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	ARP3	P47117	449 aa	Known RBP	4.08	□□□□□ -1.76
SAM4	YPL273W	ECM27	P47144	725 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	CWC23	P52868	283 aa	Predicted RBP	4.08	□□□□□ -1.76
SAM4	YPL273W	YGR219W	P53307	113 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	CPD1	P53314	239 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	SSU72	P53538	206 aa	Predicted RBP	4.08	□□□□□ -1.76
SAM4	YPL273W	LSM7	P53905	115 aa	Known RBP	4.08	□□□□□ -1.76
SAM4	YPL273W	ACT1	P60010	375 aa	Known RBP	4.08	□□□□□ -1.76
SAM4	YPL273W	MSC3	Q05812	728 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	PAM18	Q07914	168 aa		4.08	□□□□□ -1.76
SAM4	YPL273W	RPN13	O13563	156 aa		4.07	□□□□□ -1.76
SAM4	YPL273W	QCR2	P07257	368 aa		4.07	□□□□□ -1.76
SAM4	YPL273W	UTP11	P34247	250 aa	Predicted RBP	4.07	□□□□□ -1.76
SAM4	YPL273W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SAM4	YPL273W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SAM4	YPL273W	AIM20	P40451	204 aa		4.07	□□□□□ -1.76
SAM4	YPL273W	ATG5	Q12380	294 aa		4.07	□□□□□ -1.76
SAM4	YPL273W	RDI1	Q12434	202 aa		4.07	□□□□□ -1.76
SAM4	YPL273W	YNL162W-A	Q3E7A8	72 aa		4.07	□□□□□ -1.76
SAM4	YPL273W	SOD1	P00445	154 aa	Known RBP	4.06	□□□□□ -1.76
SAM4	YPL273W	PET494	P07390	489 aa	Predicted RBP	4.06	□□□□□ -1.76
SAM4	YPL273W	CAP2	P13517	287 aa		4.06	□□□□□ -1.76
SAM4	YPL273W	SPT14	P32363	452 aa		4.06	□□□□□ -1.76
SAM4	YPL273W	ECM33	P38248	429 aa	Known RBP	4.06	□□□□□ -1.76
SAM4	YPL273W	ERV15	P38312	142 aa		4.06	□□□□□ -1.76
SAM4	YPL273W	MIC12	P38341	106 aa		4.06	□□□□□ -1.76
SAM4	YPL273W	MPC2	P38857	129 aa		4.06	□□□□□ -1.76
SAM4	YPL273W	DFG10	P40526	253 aa		4.06	□□□□□ -1.76
SAM4	YPL273W	TPN1	P53099	579 aa		4.06	□□□□□ -1.76
SAM4	YPL273W	RAD28	Q12021	506 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms