RNA–Protein interactions for RNA: YPL092W

SSU1, Transcript of Plasma membrane sulfite pump involved in sulfite metabolism, yeast

Gene SSU1, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU1	YPL092W	YOR186W	Q08560	144 aa		3.19	□□□□□ -1.9
SSU1	YPL092W	FRE8	Q12209	686 aa		3.19	□□□□□ -1.9
SSU1	YPL092W	RDI1	Q12434	202 aa		3.19	□□□□□ -1.9
SSU1	YPL092W	YOR192C-C	Q3E736	78 aa		3.19	□□□□□ -1.9
SSU1	YPL092W	ADH2	P00331	348 aa	Known RBP	3.18	□□□□□ -1.9
SSU1	YPL092W	RPS23A	P0CX29	145 aa	Known RBP	3.18	□□□□□ -1.9
SSU1	YPL092W	RPS23B	P0CX30	145 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	NHP6B	P11633	99 aa	Known RBP	3.18	□□□□□ -1.9
SSU1	YPL092W	GRX2	P17695	143 aa	Known RBP	3.18	□□□□□ -1.9
SSU1	YPL092W	BUD23	P25627	275 aa	Predicted RBP	3.18	□□□□□ -1.9
SSU1	YPL092W	PPQ1	P32945	549 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	RMD6	P39975	231 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	SLM1	P40485	686 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	GNA1	P43577	159 aa	Predicted RBP	3.18	□□□□□ -1.9
SSU1	YPL092W	GON7	P46984	123 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	PRM15	Q03262	622 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	YML018C	Q03730	393 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	VBA1	Q04301	562 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	PIN3	Q06449	215 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	SYM1	Q06563	197 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	PML1	Q07930	204 aa	Predicted RBP	3.18	□□□□□ -1.9
SSU1	YPL092W	YOL118C	Q08259	102 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	YOR385W	Q08909	290 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	YOR029W	Q12243	111 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	FSH3	Q99369	266 aa		3.18	□□□□□ -1.9
SSU1	YPL092W	TRP1	P00912	224 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	SEN2	P16658	377 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	IFM1	P25038	676 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	RFA3	P26755	122 aa	Known RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	OCH1	P31755	480 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	MNS1	P32906	549 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	RPB7	P34087	171 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	PAN3	P36102	679 aa	Predicted RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	SWD2	P36104	329 aa	Predicted RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	MRPL3	P36516	390 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	ATP3	P38077	311 aa	Known RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	QDR3	P38227	689 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	GLR1	P41921	483 aa	Known RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	RPA34	P47006	233 aa	Predicted RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	ALG9	P53868	555 aa	Known RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	APJ1	P53940	528 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	MRPS16	Q02608	121 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	FEX2	Q08991	375 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	FCY22	Q12119	530 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	TPT1	Q12272	230 aa	Known RBP	3.17	□□□□□ -1.9
SSU1	YPL092W	YMR105W-A	Q8TGS8	64 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	PET20	Q99373	253 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	BPH1	P25356	2167 aa		3.17	□□□□□ -1.9
SSU1	YPL092W	SAR1	P20606	190 aa	Known RBP	3.16	□□□□□ -1.9
SSU1	YPL092W	YCR016W	P25617	290 aa	Known RBP	3.16	□□□□□ -1.9
SSU1	YPL092W	SRL3	P36167	246 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	POP8	P38208	133 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	PRS2	P38620	318 aa	Known RBP	3.16	□□□□□ -1.9
SSU1	YPL092W	YER121W	P40076	114 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	CCS1	P40202	249 aa	Known RBP	3.16	□□□□□ -1.9
SSU1	YPL092W	SIM1	P40472	476 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	YIL012W	P40551	113 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	MRX5	P47007	382 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	SLX9	P53251	210 aa	Predicted RBP	3.16	□□□□□ -1.9
SSU1	YPL092W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
SSU1	YPL092W	TSA2	Q04120	196 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	FEX1	Q08913	375 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	YCL048W-A	Q2V2Q2	79 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	YLR365W	Q7LIF2	110 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	ATG40	Q99325	256 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	UBA3	Q99344	299 aa		3.16	□□□□□ -1.9
SSU1	YPL092W	CYC3	P06182	269 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	ARG80	P07249	177 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	GCN3	P14741	305 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	MIR1	P23641	311 aa	Known RBP	3.15	□□□□□ -1.9
SSU1	YPL092W	YCR101C	P25607	182 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	MRP17	P28778	131 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	TRR1	P29509	319 aa	Known RBP	3.15	□□□□□ -1.9
SSU1	YPL092W	UTP30	P36144	274 aa	Known RBP	3.15	□□□□□ -1.9
SSU1	YPL092W	YGL262W	P53054	175 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	GIM3	P53900	129 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	THI74	Q04083	370 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	FIT1	Q04433	528 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	UPS1	Q05776	175 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	RFM1	Q12192	310 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	RTR2	Q12378	196 aa		3.15	□□□□□ -1.9
SSU1	YPL092W	NUM1	Q00402	2748 aa		3.15	□□□□□ -1.91
SSU1	YPL092W	PUT1	P09368	476 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	COS8	P38723	381 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	RRF1	P38771	230 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	PIR5	P46999	287 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	LSM1	P47017	172 aa	Known RBP	3.14	□□□□□ -1.91
SSU1	YPL092W	SOL1	P50278	321 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	SBH2	P52871	88 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	CWC25	P53854	179 aa	Known RBP	3.14	□□□□□ -1.91
SSU1	YPL092W	YNL046W	P53956	172 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	HSK3	P69852	69 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	RIM9	Q04734	239 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	SCP1	Q08873	200 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	MED4	Q12343	284 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	YPR108W-A	Q3E7B3	70 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	HUG1	Q6Q5K6	68 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	Q0297	Q9ZZV8	51 aa		3.14	□□□□□ -1.91
SSU1	YPL092W	TPI1	P00942	248 aa	Known RBP	3.13	□□□□□ -1.91
SSU1	YPL092W	RPS8A	P0CX39	200 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms