RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W UTR5P32630 166 aa2.5□□□□□ -2.01
HSH49YOR319W YET1P35723 206 aa2.5□□□□□ -2.01
HSH49YOR319W KDX1P36005 433 aa2.5□□□□□ -2.01
HSH49YOR319W ERV15P38312 142 aa2.5□□□□□ -2.01
HSH49YOR319W YNR062CP53748 327 aa2.5□□□□□ -2.01
HSH49YOR319W FSF1Q12029 327 aaKnown RBP2.5□□□□□ -2.01
HSH49YOR319W YOR342CQ12182 319 aa2.5□□□□□ -2.01
HSH49YOR319W YAR023CD6VPM8 179 aa2.49□□□□□ -2.01
HSH49YOR319W SHE2P36068 246 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
HSH49YOR319W FIG1P38224 298 aa2.49□□□□□ -2.01
HSH49YOR319W PHO88P38264 188 aaPredicted RBP2.49□□□□□ -2.01
HSH49YOR319W NSG1P38837 291 aa2.49□□□□□ -2.01
HSH49YOR319W TIR3P40552 269 aa2.49□□□□□ -2.01
HSH49YOR319W NSL1Q12143 216 aa2.49□□□□□ -2.01
HSH49YOR319W YLR412C-AQ3E742 68 aa2.49□□□□□ -2.01
HSH49YOR319W SCL1P21243 252 aaKnown RBP2.48□□□□□ -2.01
HSH49YOR319W SVP26P38869 228 aa2.48□□□□□ -2.01
HSH49YOR319W EAF6P47128 113 aa2.48□□□□□ -2.01
HSH49YOR319W BOL2P53082 120 aa2.48□□□□□ -2.01
HSH49YOR319W CGI121Q03705 181 aaKnown RBP2.48□□□□□ -2.01
HSH49YOR319W YOL014WQ08110 124 aa2.48□□□□□ -2.01
HSH49YOR319W RDI1Q12434 202 aa2.48□□□□□ -2.01
HSH49YOR319W YML100W-AQ8TGT0 57 aa2.48□□□□□ -2.01
HSH49YOR319W RFC2P40348 353 aa2.47□□□□□ -2.01
HSH49YOR319W YFL019CP43576 117 aa2.47□□□□□ -2.01
HSH49YOR319W YFH7P43591 353 aa2.47□□□□□ -2.01
HSH49YOR319W GPI14P47088 403 aaKnown RBP2.47□□□□□ -2.01
HSH49YOR319W ERG25P53045 309 aa2.47□□□□□ -2.01
HSH49YOR319W HSK3P69852 69 aa2.47□□□□□ -2.01
HSH49YOR319W MAK3Q03503 176 aa2.47□□□□□ -2.01
HSH49YOR319W NAT3Q06504 195 aa2.47□□□□□ -2.01
HSH49YOR319W DGK1Q12382 290 aa2.47□□□□□ -2.01
HSH49YOR319W ATG40Q99325 256 aa2.47□□□□□ -2.01
HSH49YOR319W PDR18P53756 1333 aa2.46□□□□□ -2.02
HSH49YOR319W SPO13P23624 291 aa2.46□□□□□ -2.02
HSH49YOR319W DER1P38307 211 aa2.46□□□□□ -2.02
HSH49YOR319W EDC3P39998 551 aaKnown RBP2.46□□□□□ -2.02
HSH49YOR319W FCY21P40039 528 aa2.46□□□□□ -2.02
HSH49YOR319W XPT1P47165 209 aa2.46□□□□□ -2.02
HSH49YOR319W YGL235WP53071 178 aa2.46□□□□□ -2.02
HSH49YOR319W YNR077CP53758 84 aa2.46□□□□□ -2.02
HSH49YOR319W TMA20P89886 181 aaPredicted RBP2.46□□□□□ -2.02
HSH49YOR319W POR1P04840 283 aaKnown RBP2.45□□□□□ -2.02
HSH49YOR319W VTC1P40046 129 aaRIP-Chip data2.45□□□□□ -2.02not detected
HSH49YOR319W YNL217WP40152 326 aa2.45□□□□□ -2.02
HSH49YOR319W MPA43P53583 542 aaPredicted RBP2.45□□□□□ -2.02
HSH49YOR319W YDL180WQ12301 547 aa2.45□□□□□ -2.02
HSH49YOR319W YHR022CP38763 256 aa2.44□□□□□ -2.02
HSH49YOR319W YJL027CP47063 138 aaPredicted RBP2.44□□□□□ -2.02
HSH49YOR319W MPC3P53311 146 aa2.44□□□□□ -2.02
HSH49YOR319W RGM1Q00453 211 aa2.44□□□□□ -2.02
HSH49YOR319W YMR099CQ03161 297 aaKnown RBP2.44□□□□□ -2.02
HSH49YOR319W VPS71Q03433 280 aa2.44□□□□□ -2.02
HSH49YOR319W YMR295CQ03559 197 aa2.44□□□□□ -2.02
HSH49YOR319W PET20Q99373 253 aa2.44□□□□□ -2.02
HSH49YOR319W RPS28BP0C0X0 67 aaKnown RBP2.43□□□□□ -2.02
HSH49YOR319W FZF1P32805 299 aa2.43□□□□□ -2.02
HSH49YOR319W TTI2P47168 421 aa2.43□□□□□ -2.02
HSH49YOR319W CYT2Q00873 224 aa2.43□□□□□ -2.02
HSH49YOR319W YDR476CQ03362 224 aa2.43□□□□□ -2.02
HSH49YOR319W RPS28AQ3E7X9 67 aaPredicted RBP2.43□□□□□ -2.02
HSH49YOR319W RAS2P01120 322 aaKnown RBP2.42□□□□□ -2.02
HSH49YOR319W DDI2P0CH63 225 aa2.42□□□□□ -2.02
HSH49YOR319W DDI3P0CH64 225 aa2.42□□□□□ -2.02
HSH49YOR319W NUF2P33895 451 aa2.42□□□□□ -2.02
HSH49YOR319W YBR209WP38311 105 aa2.42□□□□□ -2.02
HSH49YOR319W AGE2P40529 298 aa2.42□□□□□ -2.02
HSH49YOR319W ERJ5P43613 295 aaPredicted RBP2.42□□□□□ -2.02
HSH49YOR319W SOL1P50278 321 aa2.42□□□□□ -2.02
HSH49YOR319W SBH2P52871 88 aa2.42□□□□□ -2.02
HSH49YOR319W YPR127WQ06494 345 aa2.42□□□□□ -2.02
HSH49YOR319W EFG1Q3E705 233 aaKnown RBP2.42□□□□□ -2.02
HSH49YOR319W YCR023CP25351 611 aa2.41□□□□□ -2.02
HSH49YOR319W CUP9P41817 306 aa2.41□□□□□ -2.02
HSH49YOR319W DAN1P47178 298 aa2.41□□□□□ -2.02
HSH49YOR319W SHH3Q04487 196 aa2.41□□□□□ -2.02
HSH49YOR319W DAS2Q12084 232 aa2.41□□□□□ -2.02
HSH49YOR319W MET5P47169 1442 aa2.41□□□□□ -2.02
HSH49YOR319W YLR236CA0A023PZG4 107 aa2.4□□□□□ -2.03
HSH49YOR319W TIR1P10863 254 aa2.4□□□□□ -2.03
HSH49YOR319W NSP1P14907 823 aaKnown RBP2.4□□□□□ -2.03
HSH49YOR319W BUB2P26448 306 aaPredicted RBP2.4□□□□□ -2.03
HSH49YOR319W TFC1P32367 649 aa2.4□□□□□ -2.03
HSH49YOR319W SRP102P36057 244 aaPredicted RBP2.4□□□□□ -2.03
HSH49YOR319W SLM6P38343 150 aa2.4□□□□□ -2.03
HSH49YOR319W DSE2P38844 325 aa2.4□□□□□ -2.03
HSH49YOR319W YFR054CP43622 192 aa2.4□□□□□ -2.03
HSH49YOR319W THI74Q04083 370 aa2.4□□□□□ -2.03
HSH49YOR319W CUE4Q04201 117 aaPredicted RBP2.4□□□□□ -2.03
HSH49YOR319W PHO85P17157 305 aa2.39□□□□□ -2.03
HSH49YOR319W GAA1P39012 614 aa2.39□□□□□ -2.03
HSH49YOR319W SPC25P40014 221 aa2.39□□□□□ -2.03
HSH49YOR319W NSA2P40078 261 aaKnown RBP2.39□□□□□ -2.03
HSH49YOR319W LSM1P47017 172 aaKnown RBP2.39□□□□□ -2.03
HSH49YOR319W YGL101WP53144 215 aa2.39□□□□□ -2.03
HSH49YOR319W TIM13P53299 105 aa2.39□□□□□ -2.03
HSH49YOR319W SAY1P53324 424 aa2.39□□□□□ -2.03
HSH49YOR319W LSM3P57743 89 aaKnown RBP2.39□□□□□ -2.03
HSH49YOR319W YLR046CQ12253 270 aa2.39□□□□□ -2.03
HSH49YOR319W YOR214CQ12282 236 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms