RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YNL184CP53876 108 aa0.86□□□□□ -2.27
DDR48YMR173W GIM3P53900 129 aa0.86□□□□□ -2.27
DDR48YMR173W YHR007C-AQ07074 71 aa0.86□□□□□ -2.27
DDR48YMR173W YLR036CQ07986 203 aa0.86□□□□□ -2.27
DDR48YMR173W YOL160WQ08321 113 aa0.86□□□□□ -2.27
DDR48YMR173W DGA1Q08650 418 aa0.86□□□□□ -2.27
DDR48YMR173W YAR023CD6VPM8 179 aa0.85□□□□□ -2.27
DDR48YMR173W PAN3P36102 679 aaPredicted RBP0.85□□□□□ -2.27
DDR48YMR173W FMP23P38231 175 aa0.85□□□□□ -2.27
DDR48YMR173W EDC3P39998 551 aaKnown RBP0.85□□□□□ -2.27
DDR48YMR173W FLX1P40464 311 aa0.85□□□□□ -2.27
DDR48YMR173W UBC7Q02159 165 aa0.85□□□□□ -2.27
DDR48YMR173W CWC27Q02770 301 aa0.85□□□□□ -2.27
DDR48YMR173W RCE1Q03530 315 aa0.85□□□□□ -2.27
DDR48YMR173W YMR295CQ03559 197 aa0.85□□□□□ -2.27
DDR48YMR173W ARO80Q04052 950 aa0.85□□□□□ -2.27
DDR48YMR173W SHH3Q04487 196 aa0.85□□□□□ -2.27
DDR48YMR173W RAD28Q12021 506 aa0.85□□□□□ -2.27
DDR48YMR173W YLR412C-AQ3E742 68 aa0.85□□□□□ -2.27
DDR48YMR173W MSB2P32334 1306 aa0.85□□□□□ -2.27
DDR48YMR173W MDM35O60200 86 aa0.84□□□□□ -2.27
DDR48YMR173W POR1P04840 283 aaKnown RBP0.84□□□□□ -2.27
DDR48YMR173W YER188C-AP0C0V2 99 aa0.84□□□□□ -2.27
DDR48YMR173W PHO85P17157 305 aa0.84□□□□□ -2.27
DDR48YMR173W SPO13P23624 291 aa0.84□□□□□ -2.27
DDR48YMR173W MGT1P26188 188 aa0.84□□□□□ -2.27
DDR48YMR173W ADE1P27616 306 aa0.84□□□□□ -2.27
DDR48YMR173W ATP7P30902 174 aa0.84□□□□□ -2.27
DDR48YMR173W YHL042WP38729 150 aa0.84□□□□□ -2.27
DDR48YMR173W MTW1P39731 289 aa0.84□□□□□ -2.27
DDR48YMR173W RIO2P40160 425 aaKnown RBP0.84□□□□□ -2.27
DDR48YMR173W YAE1P47118 141 aaPredicted RBP0.84□□□□□ -2.27
DDR48YMR173W ARO8P53090 500 aaKnown RBP0.84□□□□□ -2.27
DDR48YMR173W HOP2P53187 214 aa0.84□□□□□ -2.27
DDR48YMR173W YNL247WP53852 767 aaKnown RBP0.84□□□□□ -2.27
DDR48YMR173W PGA1P53896 198 aa0.84□□□□□ -2.27
DDR48YMR173W DAD4P69851 72 aa0.84□□□□□ -2.27
DDR48YMR173W GRX5Q02784 150 aa0.84□□□□□ -2.27
DDR48YMR173W YPR174CQ06616 221 aaPredicted RBP0.84□□□□□ -2.27
DDR48YMR173W YOL024WQ08172 172 aa0.84□□□□□ -2.27
DDR48YMR173W YNL146C-AQ3E7Z1 64 aa0.84□□□□□ -2.27
DDR48YMR173W YPR014CQ6B0W2 109 aa0.84□□□□□ -2.27
DDR48YMR173W IGO2Q9P305 131 aa0.84□□□□□ -2.27
DDR48YMR173W TAH1P25638 111 aaPredicted RBP0.83□□□□□ -2.28
DDR48YMR173W SFK1P35735 353 aa0.83□□□□□ -2.28
DDR48YMR173W VMA22P38784 181 aa0.83□□□□□ -2.28
DDR48YMR173W NSG1P38837 291 aa0.83□□□□□ -2.28
DDR48YMR173W EGD2P38879 174 aaKnown RBP0.83□□□□□ -2.28
DDR48YMR173W MPC3P53311 146 aa0.83□□□□□ -2.28
DDR48YMR173W NRK1P53915 240 aa0.83□□□□□ -2.28
DDR48YMR173W VPS71Q03433 280 aa0.83□□□□□ -2.28
DDR48YMR173W ATG38Q05789 226 aaKnown RBP0.83□□□□□ -2.28
DDR48YMR173W NOC4Q06512 552 aaPredicted RBP0.83□□□□□ -2.28
DDR48YMR173W MPD1Q12404 318 aaKnown RBP0.83□□□□□ -2.28
DDR48YMR173W AHC2P25649 128 aa0.82□□□□□ -2.28
DDR48YMR173W HPA3P39979 161 aa0.82□□□□□ -2.28
DDR48YMR173W CUP9P41817 306 aa0.82□□□□□ -2.28
DDR48YMR173W XPT1P47165 209 aa0.82□□□□□ -2.28
DDR48YMR173W JAC1P53193 184 aa0.82□□□□□ -2.28
DDR48YMR173W HPT1Q04178 221 aaKnown RBP0.82□□□□□ -2.28
DDR48YMR173W NAT3Q06504 195 aa0.82□□□□□ -2.28
DDR48YMR173W YIL177CP40434 1758 aa0.82□□□□□ -2.28
DDR48YMR173W YJL225CP40889 1758 aa0.82□□□□□ -2.28
DDR48YMR173W TIR1P10863 254 aa0.81□□□□□ -2.28
DDR48YMR173W IDP1P21954 428 aaKnown RBP0.81□□□□□ -2.28
DDR48YMR173W TRX3P25372 127 aa0.81□□□□□ -2.28
DDR48YMR173W VPS51P36116 164 aa0.81□□□□□ -2.28
DDR48YMR173W TVP23P38962 199 aa0.81□□□□□ -2.28
DDR48YMR173W SEC72P39742 193 aaKnown RBP0.81□□□□□ -2.28
DDR48YMR173W NSA2P40078 261 aaKnown RBP0.81□□□□□ -2.28
DDR48YMR173W YFL065CP43539 102 aa0.81□□□□□ -2.28
DDR48YMR173W YJR111CP47148 283 aaKnown RBP0.81□□□□□ -2.28
DDR48YMR173W YMR099CQ03161 297 aaKnown RBP0.81□□□□□ -2.28
DDR48YMR173W AIM34Q03673 198 aa0.81□□□□□ -2.28
DDR48YMR173W PLP1Q04004 230 aa0.81□□□□□ -2.28
DDR48YMR173W GPI17Q04080 534 aa0.81□□□□□ -2.28
DDR48YMR173W SHH4Q06236 168 aa0.81□□□□□ -2.28
DDR48YMR173W PRP11Q07350 266 aaPredicted RBP0.81□□□□□ -2.28
DDR48YMR173W YOL014WQ08110 124 aa0.81□□□□□ -2.28
DDR48YMR173W IRC23Q08416 157 aa0.81□□□□□ -2.28
DDR48YMR173W YPR013CQ12145 317 aa0.81□□□□□ -2.28
DDR48YMR173W YOR015WQ12169 119 aa0.81□□□□□ -2.28
DDR48YMR173W YOR342CQ12182 319 aa0.81□□□□□ -2.28
DDR48YMR173W YML100W-AQ8TGT0 57 aa0.81□□□□□ -2.28
DDR48YMR173W RAD9P14737 1309 aa0.81□□□□□ -2.28
DDR48YMR173W AQY2P0CD90 149 aa0.8□□□□□ -2.28
DDR48YMR173W MAK31P23059 88 aa0.8□□□□□ -2.28
DDR48YMR173W SEC14P24280 304 aaKnown RBP0.8□□□□□ -2.28
DDR48YMR173W TRR1P29509 319 aaKnown RBP0.8□□□□□ -2.28
DDR48YMR173W NUF2P33895 451 aa0.8□□□□□ -2.28
DDR48YMR173W YRA2P36036 203 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
DDR48YMR173W MAK5P38112 773 aaPredicted RBP0.8□□□□□ -2.28
DDR48YMR173W SPC25P40014 221 aa0.8□□□□□ -2.28
DDR48YMR173W SOK1P40317 901 aa0.8□□□□□ -2.28
DDR48YMR173W YPL073CP40323 161 aa0.8□□□□□ -2.28
DDR48YMR173W POG1P40473 351 aa0.8□□□□□ -2.28
DDR48YMR173W HYR1P40581 163 aaKnown RBP0.8□□□□□ -2.28
DDR48YMR173W YFL019CP43576 117 aa0.8□□□□□ -2.28
DDR48YMR173W ALB1P47019 175 aaPredicted RBP0.8□□□□□ -2.28
DDR48YMR173W THG1P53215 237 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms