RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C SPC2Q04969 178 aa2.14□□□□□ -2.07
YMR046CYMR046C YMR226CQ05016 267 aaKnown RBP2.14□□□□□ -2.07
YMR046CYMR046C YPL257WQ08974 193 aa2.14□□□□□ -2.07
YMR046CYMR046C HTL1Q9URQ5 78 aa2.14□□□□□ -2.07
YMR046CYMR046C TRX3P25372 127 aa2.13□□□□□ -2.07
YMR046CYMR046C TFC1P32367 649 aa2.13□□□□□ -2.07
YMR046CYMR046C ASF2P32448 525 aaPredicted RBP2.13□□□□□ -2.07
YMR046CYMR046C PTC1P35182 281 aa2.13□□□□□ -2.07
YMR046CYMR046C CBT1P36038 271 aaPredicted RBP2.13□□□□□ -2.07
YMR046CYMR046C MRPL17P36528 281 aa2.13□□□□□ -2.07
YMR046CYMR046C YER188WP40103 239 aa2.13□□□□□ -2.07
YMR046CYMR046C PEX17P40155 199 aa2.13□□□□□ -2.07
YMR046CYMR046C ARC15P40518 154 aaRIP-Chip data2.13□□□□□ -2.07not detected
YMR046CYMR046C CAT5P41735 233 aa2.13□□□□□ -2.07
YMR046CYMR046C CIS3P47001 227 aa2.13□□□□□ -2.07
YMR046CYMR046C APS3P47064 194 aa2.13□□□□□ -2.07
YMR046CYMR046C PAC10P48363 199 aa2.13□□□□□ -2.07
YMR046CYMR046C RAD17P48581 401 aa2.13□□□□□ -2.07
YMR046CYMR046C BRR6P53062 197 aa2.13□□□□□ -2.07
YMR046CYMR046C CAB4P53332 305 aa2.13□□□□□ -2.07
YMR046CYMR046C GAS3Q03655 524 aa2.13□□□□□ -2.07
YMR046CYMR046C YLR036CQ07986 203 aa2.13□□□□□ -2.07
YMR046CYMR046C MHF2Q3E829 80 aa2.13□□□□□ -2.07
YMR046CYMR046C FBA1P14540 359 aaKnown RBP2.12□□□□□ -2.07
YMR046CYMR046C URA6P15700 204 aa2.12□□□□□ -2.07
YMR046CYMR046C TAH1P25638 111 aaPredicted RBP2.12□□□□□ -2.07
YMR046CYMR046C SEC17P32602 292 aa2.12□□□□□ -2.07
YMR046CYMR046C UTR5P32630 166 aa2.12□□□□□ -2.07
YMR046CYMR046C SUI1P32911 108 aaKnown RBP2.12□□□□□ -2.07
YMR046CYMR046C YNL194CP40169 301 aa2.12□□□□□ -2.07
YMR046CYMR046C YGR201CP42936 225 aa2.12□□□□□ -2.07
YMR046CYMR046C PRM10P42946 383 aa2.12□□□□□ -2.07
YMR046CYMR046C RPA43P46669 326 aa2.12□□□□□ -2.07
YMR046CYMR046C YJR056CP47115 236 aa2.12□□□□□ -2.07
YMR046CYMR046C NUP57P48837 541 aa2.12□□□□□ -2.07
YMR046CYMR046C MGA1P53050 456 aa2.12□□□□□ -2.07
YMR046CYMR046C ALG13P53178 202 aa2.12□□□□□ -2.07
YMR046CYMR046C CGR1P53188 120 aa2.12□□□□□ -2.07
YMR046CYMR046C IGO1P53897 168 aa2.12□□□□□ -2.07
YMR046CYMR046C DID2P69771 204 aa2.12□□□□□ -2.07
YMR046CYMR046C YMR279CQ03263 540 aa2.12□□□□□ -2.07
YMR046CYMR046C MIX17Q03667 156 aa2.12□□□□□ -2.07
YMR046CYMR046C YML108WQ03759 105 aa2.12□□□□□ -2.07
YMR046CYMR046C HEM25Q07534 307 aa2.12□□□□□ -2.07
YMR046CYMR046C YOR214CQ12282 236 aa2.12□□□□□ -2.07
YMR046CYMR046C MHT1Q12525 324 aa2.12□□□□□ -2.07
YMR046CYMR046C YOR020W-AQ3E824 90 aa2.12□□□□□ -2.07
YMR046CYMR046C YHR139C-AO13536 103 aa2.11□□□□□ -2.07
YMR046CYMR046C RPL28P02406 149 aaKnown RBP2.11□□□□□ -2.07
YMR046CYMR046C Q0255P03881 472 aa2.11□□□□□ -2.07
YMR046CYMR046C CDC36P06100 191 aaPredicted RBP2.11□□□□□ -2.07
YMR046CYMR046C ADH3P07246 375 aaKnown RBP2.11□□□□□ -2.07
YMR046CYMR046C DSF1P0CX08 502 aa2.11□□□□□ -2.07
YMR046CYMR046C YNR073CP0CX09 502 aa2.11□□□□□ -2.07
YMR046CYMR046C CLB6P32943 380 aa2.11□□□□□ -2.07
YMR046CYMR046C SRY1P36007 326 aa2.11□□□□□ -2.07
YMR046CYMR046C RPF1P38805 295 aaKnown RBP2.11□□□□□ -2.07
YMR046CYMR046C YHR125WP38831 101 aa2.11□□□□□ -2.07
YMR046CYMR046C RIO2P40160 425 aaKnown RBP2.11□□□□□ -2.07
YMR046CYMR046C HPM1P40481 377 aa2.11□□□□□ -2.07
YMR046CYMR046C MRPL49P40858 161 aaPredicted RBP2.11□□□□□ -2.07
YMR046CYMR046C FAR7P43592 221 aa2.11□□□□□ -2.07
YMR046CYMR046C CWC23P52868 283 aaPredicted RBP2.11□□□□□ -2.07
YMR046CYMR046C ERV29P53337 310 aa2.11□□□□□ -2.07
YMR046CYMR046C YNL033WP53964 284 aa2.11□□□□□ -2.07
YMR046CYMR046C YNL019CP53975 284 aa2.11□□□□□ -2.07
YMR046CYMR046C ABF2Q02486 183 aa2.11□□□□□ -2.07
YMR046CYMR046C NIP7Q08962 181 aaKnown RBP2.11□□□□□ -2.07
YMR046CYMR046C JLP1Q12358 412 aa2.11□□□□□ -2.07
YMR046CYMR046C LSO2Q3E772 92 aaKnown RBP2.11□□□□□ -2.07
YMR046CYMR046C UBR1P19812 1950 aa2.1□□□□□ -2.07
YMR046CYMR046C KSS1P14681 368 aa2.1□□□□□ -2.07
YMR046CYMR046C MER1P16523 270 aa2.1□□□□□ -2.07
YMR046CYMR046C RPS1BP23248 255 aaKnown RBP2.1□□□□□ -2.07
YMR046CYMR046C YOR062CP36025 268 aa2.1□□□□□ -2.07
YMR046CYMR046C MTW1P39731 289 aa2.1□□□□□ -2.07
YMR046CYMR046C ADO1P47143 340 aaKnown RBP2.1□□□□□ -2.07
YMR046CYMR046C YJR146WP47174 117 aa2.1□□□□□ -2.07
YMR046CYMR046C RBL2P48606 106 aaKnown RBP2.1□□□□□ -2.07
YMR046CYMR046C GPI11Q06636 219 aa2.1□□□□□ -2.07
YMR046CYMR046C YDR157WA0A023PZE8 133 aa2.09□□□□□ -2.08
YMR046CYMR046C SCO1P23833 295 aa2.09□□□□□ -2.08
YMR046CYMR046C SCM4P32564 187 aa2.09□□□□□ -2.08
YMR046CYMR046C RPS20P38701 121 aaKnown RBP2.09□□□□□ -2.08
YMR046CYMR046C AIM2P39721 246 aa2.09□□□□□ -2.08
YMR046CYMR046C PDS1P40316 373 aaPredicted RBP2.09□□□□□ -2.08
YMR046CYMR046C GVP36P40531 326 aaKnown RBP2.09□□□□□ -2.08
YMR046CYMR046C SMD3P43321 101 aaKnown RBP2.09□□□□□ -2.08
YMR046CYMR046C ALB1P47019 175 aaPredicted RBP2.09□□□□□ -2.08
YMR046CYMR046C YGR026WP53217 278 aa2.09□□□□□ -2.08
YMR046CYMR046C YLR460CP54007 376 aa2.09□□□□□ -2.08
YMR046CYMR046C MRPS17Q03246 237 aaPredicted RBP2.09□□□□□ -2.08
YMR046CYMR046C MHF1Q3E835 90 aa2.09□□□□□ -2.08
YMR046CYMR046C VPS13Q07878 3144 aa2.08□□□□□ -2.08
YMR046CYMR046C CDC28P00546 298 aaKnown RBP2.08□□□□□ -2.08
YMR046CYMR046C YSF3P0C074 85 aaPredicted RBP2.08□□□□□ -2.08
YMR046CYMR046C PET9P18239 318 aaKnown RBP2.08□□□□□ -2.08
YMR046CYMR046C UBC8P28263 218 aa2.08□□□□□ -2.08
YMR046CYMR046C SKG1P36169 355 aa2.08□□□□□ -2.08
YMR046CYMR046C PDX3P38075 228 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms