RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C YGR219WP53307 113 aa3.06□□□□□ -1.92
VPS71YML041C PRM7Q12459 698 aa3.06□□□□□ -1.92
VPS71YML041C MIG1P27705 504 aa3.05□□□□□ -1.92
VPS71YML041C ACP1P32463 125 aa3.05□□□□□ -1.92
VPS71YML041C OPY1P38271 328 aa3.05□□□□□ -1.92
VPS71YML041C YBR285WP38354 144 aa3.05□□□□□ -1.92
VPS71YML041C PRM10P42946 383 aa3.05□□□□□ -1.92
VPS71YML041C YJL144WP47009 104 aa3.05□□□□□ -1.92
VPS71YML041C YPR127WQ06494 345 aa3.05□□□□□ -1.92
VPS71YML041C YPR096CO13587 100 aa3.04□□□□□ -1.92
VPS71YML041C MDH3P32419 343 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
VPS71YML041C PAN3P36102 679 aaPredicted RBP3.04□□□□□ -1.92
VPS71YML041C YAP3P38749 330 aa3.04□□□□□ -1.92
VPS71YML041C GPI14P47088 403 aaKnown RBP3.04□□□□□ -1.92
VPS71YML041C YDL180WQ12301 547 aa3.04□□□□□ -1.92
VPS71YML041C YML100W-AQ8TGT0 57 aa3.04□□□□□ -1.92
VPS71YML041C PDR18P53756 1333 aa3.03□□□□□ -1.92
VPS71YML041C YAR023CD6VPM8 179 aa3.03□□□□□ -1.92
VPS71YML041C PET54P10834 293 aa3.03□□□□□ -1.92
VPS71YML041C YET1P35723 206 aa3.03□□□□□ -1.92
VPS71YML041C KDX1P36005 433 aa3.03□□□□□ -1.92
VPS71YML041C POP7P38291 140 aa3.03□□□□□ -1.92
VPS71YML041C YHR180WP38868 163 aa3.03□□□□□ -1.92
VPS71YML041C YJR146WP47174 117 aa3.03□□□□□ -1.92
VPS71YML041C YGL101WP53144 215 aa3.03□□□□□ -1.92
VPS71YML041C YDR274CP87283 123 aa3.03□□□□□ -1.92
VPS71YML041C PKR1Q03880 122 aaKnown RBP3.03□□□□□ -1.92
VPS71YML041C SPG3Q04398 127 aaPredicted RBP3.03□□□□□ -1.92
VPS71YML041C YOL014WQ08110 124 aa3.03□□□□□ -1.92
VPS71YML041C DGK1Q12382 290 aa3.03□□□□□ -1.92
VPS71YML041C YCR023CP25351 611 aa3.02□□□□□ -1.93
VPS71YML041C NUF2P33895 451 aa3.02□□□□□ -1.93
VPS71YML041C SHE2P36068 246 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
VPS71YML041C FCY21P40039 528 aa3.02□□□□□ -1.93
VPS71YML041C RPL33BP41056 107 aaKnown RBP3.02□□□□□ -1.93
VPS71YML041C TTI2P47168 421 aa3.02□□□□□ -1.93
VPS71YML041C DOC1P53068 250 aa3.02□□□□□ -1.93
VPS71YML041C YDC1Q02896 317 aa3.02□□□□□ -1.93
VPS71YML041C VPS71Q03433 280 aa3.02□□□□□ -1.93
VPS71YML041C SPC2Q04969 178 aa3.02□□□□□ -1.93
VPS71YML041C ATO3Q12359 275 aa3.02□□□□□ -1.93
VPS71YML041C CLB6P32943 380 aa3.01□□□□□ -1.93
VPS71YML041C TIM13P53299 105 aa3.01□□□□□ -1.93
VPS71YML041C MRPS8Q03799 155 aa3.01□□□□□ -1.93
VPS71YML041C HRT1Q08273 121 aa3.01□□□□□ -1.93
VPS71YML041C FSF1Q12029 327 aaKnown RBP3.01□□□□□ -1.93
VPS71YML041C YFL019CP43576 117 aa3□□□□□ -1.93
VPS71YML041C CIS3P47001 227 aa3□□□□□ -1.93
VPS71YML041C SLM2P53955 656 aa3□□□□□ -1.93
VPS71YML041C LSM3P57743 89 aaKnown RBP3□□□□□ -1.93
VPS71YML041C YMR295CQ03559 197 aa3□□□□□ -1.93
VPS71YML041C RAV2Q03956 351 aa3□□□□□ -1.93
VPS71YML041C VPS68Q12016 184 aa3□□□□□ -1.93
VPS71YML041C YLR046CQ12253 270 aa3□□□□□ -1.93
VPS71YML041C FAB1P34756 2278 aa2.99□□□□□ -1.93
VPS71YML041C IDP1P21954 428 aaKnown RBP2.99□□□□□ -1.93
VPS71YML041C PEX34P25584 144 aa2.99□□□□□ -1.93
VPS71YML041C ERV15P38312 142 aa2.99□□□□□ -1.93
VPS71YML041C SLM6P38343 150 aa2.99□□□□□ -1.93
VPS71YML041C APQ12P40532 138 aa2.99□□□□□ -1.93
VPS71YML041C GLR1P41921 483 aaKnown RBP2.99□□□□□ -1.93
VPS71YML041C DAD3P69850 94 aa2.99□□□□□ -1.93
VPS71YML041C THI74Q04083 370 aa2.99□□□□□ -1.93
VPS71YML041C NAT3Q06504 195 aa2.99□□□□□ -1.93
VPS71YML041C UBI4P0CG63 381 aaKnown RBP2.98□□□□□ -1.93
VPS71YML041C GIM4P40005 111 aaKnown RBP2.98□□□□□ -1.93
VPS71YML041C VTC1P40046 129 aaRIP-Chip data2.98□□□□□ -1.93not detected
VPS71YML041C DLS1P40366 167 aa2.98□□□□□ -1.93
VPS71YML041C YNR062CP53748 327 aa2.98□□□□□ -1.93
VPS71YML041C HHT1P61830 136 aa2.98□□□□□ -1.93
VPS71YML041C GRX5Q02784 150 aa2.98□□□□□ -1.93
VPS71YML041C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
VPS71YML041C DAS2Q12084 232 aa2.98□□□□□ -1.93
VPS71YML041C EMC6Q12431 108 aa2.98□□□□□ -1.93
VPS71YML041C TAF2P23255 1407 aa2.98□□□□□ -1.93
VPS71YML041C POR1P04840 283 aaKnown RBP2.97□□□□□ -1.93
VPS71YML041C UBC8P28263 218 aa2.97□□□□□ -1.93
VPS71YML041C PEX4P29340 183 aa2.97□□□□□ -1.93
VPS71YML041C UPS2P35200 230 aa2.97□□□□□ -1.93
VPS71YML041C NSA2P40078 261 aaKnown RBP2.97□□□□□ -1.93
VPS71YML041C TIR3P40552 269 aa2.97□□□□□ -1.93
VPS71YML041C EAF6P47128 113 aa2.97□□□□□ -1.93
VPS71YML041C YMR099CQ03161 297 aaKnown RBP2.97□□□□□ -1.93
VPS71YML041C SHH3Q04487 196 aa2.97□□□□□ -1.93
VPS71YML041C RDS3Q06835 107 aaPredicted RBP2.97□□□□□ -1.93
VPS71YML041C YOR214CQ12282 236 aa2.97□□□□□ -1.93
VPS71YML041C ATG40Q99325 256 aa2.97□□□□□ -1.93
VPS71YML041C YOR1P53049 1477 aa2.96□□□□□ -1.93
VPS71YML041C SVP26P38869 228 aa2.96□□□□□ -1.94
VPS71YML041C CUP9P41817 306 aa2.96□□□□□ -1.94
VPS71YML041C ERG25P53045 309 aa2.96□□□□□ -1.94
VPS71YML041C YGR042WP53227 271 aa2.96□□□□□ -1.94
VPS71YML041C NSP1P14907 823 aaKnown RBP2.95□□□□□ -1.94
VPS71YML041C YBR209WP38311 105 aa2.95□□□□□ -1.94
VPS71YML041C IPI1P38803 334 aaPredicted RBP2.95□□□□□ -1.94
VPS71YML041C YNL217WP40152 326 aa2.95□□□□□ -1.94
VPS71YML041C ERJ5P43613 295 aaPredicted RBP2.95□□□□□ -1.94
VPS71YML041C SOL1P50278 321 aa2.95□□□□□ -1.94
VPS71YML041C YPD1Q07688 167 aa2.95□□□□□ -1.94
VPS71YML041C YPR202WQ08993 238 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms