RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YLR031WQ07978 186 aa1.01□□□□□ -2.25
SEC22YLR268W YLR036CQ07986 203 aa1.01□□□□□ -2.25
SEC22YLR268W DGA1Q08650 418 aa1.01□□□□□ -2.25
SEC22YLR268W MSB2P32334 1306 aa1□□□□□ -2.25
SEC22YLR268W YAR023CD6VPM8 179 aa1□□□□□ -2.25
SEC22YLR268W MTW1P39731 289 aa1□□□□□ -2.25
SEC22YLR268W PDS1P40316 373 aaPredicted RBP1□□□□□ -2.25
SEC22YLR268W YPL073CP40323 161 aa1□□□□□ -2.25
SEC22YLR268W TMA22P47089 198 aaPredicted RBP1□□□□□ -2.25
SEC22YLR268W UBC12P52491 188 aa1□□□□□ -2.25
SEC22YLR268W UBC7Q02159 165 aa1□□□□□ -2.25
SEC22YLR268W YMR295CQ03559 197 aa1□□□□□ -2.25
SEC22YLR268W YHR007C-AQ07074 71 aa1□□□□□ -2.25
SEC22YLR268W ADE1P27616 306 aa0.99□□□□□ -2.25
SEC22YLR268W CAF4P36130 643 aa0.99□□□□□ -2.25
SEC22YLR268W FMP23P38231 175 aa0.99□□□□□ -2.25
SEC22YLR268W RIO2P40160 425 aaKnown RBP0.99□□□□□ -2.25
SEC22YLR268W YJR111CP47148 283 aaKnown RBP0.99□□□□□ -2.25
SEC22YLR268W YMR099CQ03161 297 aaKnown RBP0.99□□□□□ -2.25
SEC22YLR268W ARO80Q04052 950 aa0.99□□□□□ -2.25
SEC22YLR268W YOL014WQ08110 124 aa0.99□□□□□ -2.25
SEC22YLR268W YOL024WQ08172 172 aa0.99□□□□□ -2.25
SEC22YLR268W IRC23Q08416 157 aa0.99□□□□□ -2.25
SEC22YLR268W YNL146C-AQ3E7Z1 64 aa0.99□□□□□ -2.25
SEC22YLR268W YML100W-AQ8TGT0 57 aa0.99□□□□□ -2.25
SEC22YLR268W CYR1P08678 2026 aaKnown RBP0.98□□□□□ -2.25
SEC22YLR268W PHO85P17157 305 aa0.98□□□□□ -2.25
SEC22YLR268W APA2P22108 325 aa0.98□□□□□ -2.25
SEC22YLR268W FLX1P40464 311 aa0.98□□□□□ -2.25
SEC22YLR268W YAE1P47118 141 aaPredicted RBP0.98□□□□□ -2.25
SEC22YLR268W TDA4P47153 279 aa0.98□□□□□ -2.25
SEC22YLR268W HOP2P53187 214 aa0.98□□□□□ -2.25
SEC22YLR268W YNL247WP53852 767 aaKnown RBP0.98□□□□□ -2.25
SEC22YLR268W RCE1Q03530 315 aa0.98□□□□□ -2.25
SEC22YLR268W YMR315WQ04869 349 aaKnown RBP0.98□□□□□ -2.25
SEC22YLR268W NOC4Q06512 552 aaPredicted RBP0.98□□□□□ -2.25
SEC22YLR268W MDM35O60200 86 aa0.97□□□□□ -2.25
SEC22YLR268W TRX3P25372 127 aa0.97□□□□□ -2.25
SEC22YLR268W TAH1P25638 111 aaPredicted RBP0.97□□□□□ -2.25
SEC22YLR268W MGT1P26188 188 aa0.97□□□□□ -2.25
SEC22YLR268W YHL018WP38744 120 aaPredicted RBP0.97□□□□□ -2.25
SEC22YLR268W CUP9P41817 306 aa0.97□□□□□ -2.25
SEC22YLR268W GIM3P53900 129 aa0.97□□□□□ -2.25
SEC22YLR268W DAD4P69851 72 aa0.97□□□□□ -2.25
SEC22YLR268W NAT3Q06504 195 aa0.97□□□□□ -2.25
SEC22YLR268W PRP11Q07350 266 aaPredicted RBP0.97□□□□□ -2.25
SEC22YLR268W YET3Q07451 203 aa0.97□□□□□ -2.25
SEC22YLR268W YDL085C-AQ3E7B7 68 aaKnown RBP0.97□□□□□ -2.25
SEC22YLR268W YPR014CQ6B0W2 109 aa0.97□□□□□ -2.25
SEC22YLR268W VAR1P02381 398 aa0.96□□□□□ -2.26
SEC22YLR268W PAM17P36147 197 aa0.96□□□□□ -2.26
SEC22YLR268W EDC3P39998 551 aaKnown RBP0.96□□□□□ -2.26
SEC22YLR268W YFL019CP43576 117 aa0.96□□□□□ -2.26
SEC22YLR268W CWC27Q02770 301 aa0.96□□□□□ -2.26
SEC22YLR268W AIM34Q03673 198 aa0.96□□□□□ -2.26
SEC22YLR268W SHH3Q04487 196 aa0.96□□□□□ -2.26
SEC22YLR268W YOR342CQ12182 319 aa0.96□□□□□ -2.26
SEC22YLR268W RPS24AP0CX31 135 aaKnown RBP0.95□□□□□ -2.26
SEC22YLR268W RPS24BP0CX32 135 aaKnown RBP0.95□□□□□ -2.26
SEC22YLR268W TIR1P10863 254 aa0.95□□□□□ -2.26
SEC22YLR268W NSP1P14907 823 aaKnown RBP0.95□□□□□ -2.26
SEC22YLR268W ATP7P30902 174 aa0.95□□□□□ -2.26
SEC22YLR268W SHG1P38337 142 aa0.95□□□□□ -2.26
SEC22YLR268W NSG1P38837 291 aa0.95□□□□□ -2.26
SEC22YLR268W HYR1P40581 163 aaKnown RBP0.95□□□□□ -2.26
SEC22YLR268W YFH7P43591 353 aa0.95□□□□□ -2.26
SEC22YLR268W PGA1P53896 198 aa0.95□□□□□ -2.26
SEC22YLR268W NRK1P53915 240 aa0.95□□□□□ -2.26
SEC22YLR268W YNL033WP53964 284 aa0.95□□□□□ -2.26
SEC22YLR268W VPS71Q03433 280 aa0.95□□□□□ -2.26
SEC22YLR268W RNH202Q05635 350 aa0.95□□□□□ -2.26
SEC22YLR268W GRX8Q05926 109 aa0.95□□□□□ -2.26
SEC22YLR268W YPR013CQ12145 317 aa0.95□□□□□ -2.26
SEC22YLR268W COX8P04039 78 aa0.94□□□□□ -2.26
SEC22YLR268W GCY1P14065 312 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
SEC22YLR268W ARO7P32178 256 aa0.94□□□□□ -2.26
SEC22YLR268W YHL042WP38729 150 aa0.94□□□□□ -2.26
SEC22YLR268W SPC25P40014 221 aa0.94□□□□□ -2.26
SEC22YLR268W FMP32P43557 207 aa0.94□□□□□ -2.26
SEC22YLR268W THG1P53215 237 aaKnown RBP0.94□□□□□ -2.26
SEC22YLR268W YMR253CQ04835 414 aa0.94□□□□□ -2.26
SEC22YLR268W FIT2Q08906 153 aa0.94□□□□□ -2.26
SEC22YLR268W MPD1Q12404 318 aaKnown RBP0.94□□□□□ -2.26
SEC22YLR268W YLR412C-AQ3E742 68 aa0.94□□□□□ -2.26
SEC22YLR268W ACC1Q00955 2233 aaKnown RBP0.93□□□□□ -2.26
SEC22YLR268W IDP1P21954 428 aaKnown RBP0.93□□□□□ -2.26
SEC22YLR268W GSP2P32836 220 aaKnown RBP0.93□□□□□ -2.26
SEC22YLR268W SFK1P35735 353 aa0.93□□□□□ -2.26
SEC22YLR268W HPA3P39979 161 aa0.93□□□□□ -2.26
SEC22YLR268W ALB1P47019 175 aaPredicted RBP0.93□□□□□ -2.26
SEC22YLR268W SNO1Q03144 224 aa0.93□□□□□ -2.26
SEC22YLR268W DIG2Q03373 323 aaKnown RBP0.93□□□□□ -2.26
SEC22YLR268W YMR252CQ04814 134 aa0.93□□□□□ -2.26
SEC22YLR268W SHH4Q06236 168 aa0.93□□□□□ -2.26
SEC22YLR268W BRX1Q08235 291 aaKnown RBP0.93□□□□□ -2.26
SEC22YLR268W FAS1P07149 2051 aaKnown RBP0.92□□□□□ -2.26
SEC22YLR268W AHC2P25649 128 aa0.92□□□□□ -2.26
SEC22YLR268W RPB7P34087 171 aa0.92□□□□□ -2.26
SEC22YLR268W NVJ1P38881 321 aa0.92□□□□□ -2.26
SEC22YLR268W NSA2P40078 261 aaKnown RBP0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms