RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W PKR1Q03880 122 aaKnown RBP1.89□□□□□ -2.11
TRM2YKR056W FYV12Q08559 129 aa1.89□□□□□ -2.11
TRM2YKR056W YPR063CQ12160 140 aa1.89□□□□□ -2.11
TRM2YKR056W TSC3Q3E790 80 aa1.89□□□□□ -2.11
TRM2YKR056W SKG1P36169 355 aa1.89□□□□□ -2.11
TRM2YKR056W FYV4P38783 130 aaPredicted RBP1.89□□□□□ -2.11
TRM2YKR056W MNN5P46982 586 aa1.89□□□□□ -2.11
TRM2YKR056W FKS1P38631 1876 aaKnown RBP1.89□□□□□ -2.11
TRM2YKR056W ADH3P07246 375 aaKnown RBP1.88□□□□□ -2.11
TRM2YKR056W CCA1P21269 546 aa1.88□□□□□ -2.11
TRM2YKR056W PEX34P25584 144 aa1.88□□□□□ -2.11
TRM2YKR056W TIF34P40217 347 aaKnown RBP1.88□□□□□ -2.11
TRM2YKR056W LSM3P57743 89 aaKnown RBP1.88□□□□□ -2.11
TRM2YKR056W TMA20P89886 181 aaPredicted RBP1.88□□□□□ -2.11
TRM2YKR056W YLR361C-AQ3E795 98 aa1.88□□□□□ -2.11
TRM2YKR056W YPR014CQ6B0W2 109 aa1.88□□□□□ -2.11
TRM2YKR056W SAS5Q99314 248 aa1.88□□□□□ -2.11
TRM2YKR056W YAR023CD6VPM8 179 aa1.87□□□□□ -2.11
TRM2YKR056W RPL30P14120 105 aaKnown RBP1.87□□□□□ -2.11
TRM2YKR056W NSG1P38837 291 aa1.87□□□□□ -2.11
TRM2YKR056W GVP36P40531 326 aaKnown RBP1.87□□□□□ -2.11
TRM2YKR056W FIP1P45976 327 aa1.87□□□□□ -2.11
TRM2YKR056W MPC3P53311 146 aa1.87□□□□□ -2.11
TRM2YKR056W RFU1Q08003 200 aa1.87□□□□□ -2.11
TRM2YKR056W YOR1P53049 1477 aa1.87□□□□□ -2.11
TRM2YKR056W SOD1P00445 154 aaKnown RBP1.87□□□□□ -2.11
TRM2YKR056W VMA11P32842 164 aa1.87□□□□□ -2.11
TRM2YKR056W TRS20P38334 175 aa1.87□□□□□ -2.11
TRM2YKR056W YJR015WP47090 510 aa1.87□□□□□ -2.11
TRM2YKR056W AIF1P52923 378 aa1.87□□□□□ -2.11
TRM2YKR056W YMR099CQ03161 297 aaKnown RBP1.87□□□□□ -2.11
TRM2YKR056W CSN9Q03981 162 aa1.87□□□□□ -2.11
TRM2YKR056W HRD1Q08109 551 aa1.87□□□□□ -2.11
TRM2YKR056W ODC2Q99297 307 aa1.87□□□□□ -2.11
TRM2YKR056W CPA1P07258 411 aaKnown RBP1.86□□□□□ -2.11
TRM2YKR056W STP22P25604 385 aa1.86□□□□□ -2.11
TRM2YKR056W AGA2P32781 87 aa1.86□□□□□ -2.11
TRM2YKR056W MRPS9P38120 278 aa1.86□□□□□ -2.11
TRM2YKR056W YHR180WP38868 163 aa1.86□□□□□ -2.11
TRM2YKR056W DLS1P40366 167 aa1.86□□□□□ -2.11
TRM2YKR056W RBL2P48606 106 aaKnown RBP1.86□□□□□ -2.11
TRM2YKR056W YDR476CQ03362 224 aa1.86□□□□□ -2.11
TRM2YKR056W YLR412C-AQ3E742 68 aa1.86□□□□□ -2.11
TRM2YKR056W POR1P04840 283 aaKnown RBP1.85□□□□□ -2.11
TRM2YKR056W PBI2P0CT04 75 aaKnown RBP1.85□□□□□ -2.11
TRM2YKR056W TIR1P10863 254 aa1.85□□□□□ -2.11
TRM2YKR056W PAN3P36102 679 aaPredicted RBP1.85□□□□□ -2.11
TRM2YKR056W YKR032WP36127 104 aa1.85□□□□□ -2.11
TRM2YKR056W FCY21P40039 528 aa1.85□□□□□ -2.11
TRM2YKR056W GLR1P41921 483 aaKnown RBP1.85□□□□□ -2.11
TRM2YKR056W YFR054CP43622 192 aa1.85□□□□□ -2.11
TRM2YKR056W YGR026WP53217 278 aa1.85□□□□□ -2.11
TRM2YKR056W TIM8P57744 87 aa1.85□□□□□ -2.11
TRM2YKR056W PST2Q12335 198 aaKnown RBP1.85□□□□□ -2.11
TRM2YKR056W RAD50P12753 1312 aa1.85□□□□□ -2.11
TRM2YKR056W PRS3P38689 320 aaKnown RBP1.85□□□□□ -2.11
TRM2YKR056W AIM2P39721 246 aa1.85□□□□□ -2.11
TRM2YKR056W AVT2P39981 480 aa1.85□□□□□ -2.11
TRM2YKR056W YER134CP40081 178 aa1.85□□□□□ -2.11
TRM2YKR056W XPT1P47165 209 aa1.85□□□□□ -2.11
TRM2YKR056W YJR146WP47174 117 aa1.85□□□□□ -2.11
TRM2YKR056W DSK2P48510 373 aa1.85□□□□□ -2.11
TRM2YKR056W DOC1P53068 250 aa1.85□□□□□ -2.11
TRM2YKR056W RCF2P53721 224 aa1.85□□□□□ -2.11
TRM2YKR056W ECM11Q04110 302 aa1.85□□□□□ -2.11
TRM2YKR056W SPC24Q04477 213 aa1.85□□□□□ -2.11
TRM2YKR056W SCW10Q04951 389 aa1.85□□□□□ -2.11
TRM2YKR056W FEX1Q08913 375 aa1.85□□□□□ -2.11
TRM2YKR056W FEX2Q08991 375 aa1.85□□□□□ -2.11
TRM2YKR056W ATP20Q12233 115 aa1.85□□□□□ -2.11
TRM2YKR056W FAS1P07149 2051 aaKnown RBP1.84□□□□□ -2.11
TRM2YKR056W SCM4P32564 187 aa1.84□□□□□ -2.11
TRM2YKR056W YIL059CP40520 121 aa1.84□□□□□ -2.11
TRM2YKR056W GLC8P41818 229 aa1.84□□□□□ -2.11
TRM2YKR056W YNR077CP53758 84 aa1.84□□□□□ -2.11
TRM2YKR056W DYN2Q02647 92 aa1.84□□□□□ -2.11
TRM2YKR056W VPS71Q03433 280 aa1.84□□□□□ -2.11
TRM2YKR056W RAV2Q03956 351 aa1.84□□□□□ -2.11
TRM2YKR056W GAL83Q04739 417 aa1.84□□□□□ -2.11
TRM2YKR056W MSW1P04803 379 aa1.83□□□□□ -2.12
TRM2YKR056W SPT14P32363 452 aa1.83□□□□□ -2.12
TRM2YKR056W YRA2P36036 203 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
TRM2YKR056W UMP1P38293 148 aa1.83□□□□□ -2.12
TRM2YKR056W YBR285WP38354 144 aa1.83□□□□□ -2.12
TRM2YKR056W YPL073CP40323 161 aa1.83□□□□□ -2.12
TRM2YKR056W ERJ5P43613 295 aaPredicted RBP1.83□□□□□ -2.12
TRM2YKR056W BUD13P46947 266 aaPredicted RBP1.83□□□□□ -2.12
TRM2YKR056W YJL027CP47063 138 aaPredicted RBP1.83□□□□□ -2.12
TRM2YKR056W EAF6P47128 113 aa1.83□□□□□ -2.12
TRM2YKR056W HHT1P61830 136 aa1.83□□□□□ -2.12
TRM2YKR056W YOR214CQ12282 236 aa1.83□□□□□ -2.12
TRM2YKR056W ATP5P09457 212 aa1.83□□□□□ -2.12
TRM2YKR056W KRE1P17260 313 aa1.83□□□□□ -2.12
TRM2YKR056W PGD1P40356 397 aa1.83□□□□□ -2.12
TRM2YKR056W YJL218WP40892 196 aaKnown RBP1.83□□□□□ -2.12
TRM2YKR056W YNR062CP53748 327 aa1.83□□□□□ -2.12
TRM2YKR056W DIG2Q03373 323 aaKnown RBP1.83□□□□□ -2.12
TRM2YKR056W NEJ1Q06148 342 aa1.83□□□□□ -2.12
TRM2YKR056W FSF1Q12029 327 aaKnown RBP1.83□□□□□ -2.12
TRM2YKR056W SEN2P16658 377 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms