RNA–Protein interactions for RNA: YKL022C

CDC16, Transcript of Subunit of the anaphase-promoting complex/cyclosome (APC/C), yeast

Gene CDC16, Length 2,523 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC16	YKL022C	RPS1B	P23248	255 aa	Known RBP	4.97	□□□□□ -1.61
CDC16	YKL022C	SKG1	P36169	355 aa		4.97	□□□□□ -1.61
CDC16	YKL022C	ARL3	Q02804	198 aa		4.97	□□□□□ -1.61
CDC16	YKL022C	SDH7	Q04401	133 aa		4.97	□□□□□ -1.61
CDC16	YKL022C	ATP14	Q12349	124 aa		4.97	□□□□□ -1.61
CDC16	YKL022C	PSF1	Q12488	208 aa		4.97	□□□□□ -1.61
CDC16	YKL022C	YPT53	P36019	220 aa		4.96	□□□□□ -1.61
CDC16	YKL022C	MRPL27	P36526	146 aa	Predicted RBP	4.96	□□□□□ -1.61
CDC16	YKL022C	ATG39	Q06159	398 aa		4.96	□□□□□ -1.61
CDC16	YKL022C	AKR2	Q12013	749 aa		4.96	□□□□□ -1.61
CDC16	YKL022C	KIN28	P06242	306 aa		4.96	□□□□□ -1.62
CDC16	YKL022C	RPS20	P38701	121 aa	Known RBP	4.96	□□□□□ -1.62
CDC16	YKL022C	ERJ5	P43613	295 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC16	YKL022C	YGR219W	P53307	113 aa		4.96	□□□□□ -1.62
CDC16	YKL022C	YML100W-A	Q8TGT0	57 aa		4.96	□□□□□ -1.62
CDC16	YKL022C	YOR304C-A	O14468	76 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	URA5	P13298	226 aa	Known RBP	4.95	□□□□□ -1.62
CDC16	YKL022C	NSG1	P38837	291 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	AVT2	P39981	480 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	YFL019C	P43576	117 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	RUB1	Q03919	77 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	GPI18	P38211	433 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	COS8	P38723	381 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	DIG2	Q03373	323 aa	Known RBP	4.95	□□□□□ -1.62
CDC16	YKL022C	NAT3	Q06504	195 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	SKI3	P17883	1432 aa	Known RBP	4.95	□□□□□ -1.62
CDC16	YKL022C	SNT2	P53127	1403 aa		4.95	□□□□□ -1.62
CDC16	YKL022C	NUP157	P40064	1391 aa	Known RBP	4.94	□□□□□ -1.62
CDC16	YKL022C	CCA1	P21269	546 aa		4.94	□□□□□ -1.62
CDC16	YKL022C	TIF34	P40217	347 aa	Known RBP	4.94	□□□□□ -1.62
CDC16	YKL022C	ALG9	P53868	555 aa	Known RBP	4.94	□□□□□ -1.62
CDC16	YKL022C	COX4	P04037	155 aa		4.94	□□□□□ -1.62
CDC16	YKL022C	MRP49	P32388	137 aa		4.94	□□□□□ -1.62
CDC16	YKL022C	YDR366C	P87287	132 aa		4.94	□□□□□ -1.62
CDC16	YKL022C	PRP11	Q07350	266 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC16	YKL022C	UTP11	P34247	250 aa	Predicted RBP	4.93	□□□□□ -1.62
CDC16	YKL022C	AIM2	P39721	246 aa		4.93	□□□□□ -1.62
CDC16	YKL022C	YNL200C	P40165	246 aa	Known RBP	4.93	□□□□□ -1.62
CDC16	YKL022C	SLM2	P53955	656 aa		4.93	□□□□□ -1.62
CDC16	YKL022C	NKP2	Q06162	153 aa		4.93	□□□□□ -1.62
CDC16	YKL022C	CNL1	Q06333	122 aa		4.93	□□□□□ -1.62
CDC16	YKL022C	RPC19	P28000	142 aa	Known RBP	4.93	□□□□□ -1.62
CDC16	YKL022C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
CDC16	YKL022C	GLR1	P41921	483 aa	Known RBP	4.93	□□□□□ -1.62
CDC16	YKL022C	ADH3	P07246	375 aa	Known RBP	4.92	□□□□□ -1.62
CDC16	YKL022C	PRE5	P40302	234 aa	Known RBP	4.92	□□□□□ -1.62
CDC16	YKL022C	HHO1	P53551	258 aa		4.92	□□□□□ -1.62
CDC16	YKL022C	VPS71	Q03433	280 aa		4.92	□□□□□ -1.62
CDC16	YKL022C	RPL9A	P05738	191 aa	Known RBP	4.92	□□□□□ -1.62
CDC16	YKL022C	PGD1	P40356	397 aa		4.92	□□□□□ -1.62
CDC16	YKL022C	RPL9B	P51401	191 aa	Known RBP	4.92	□□□□□ -1.62
CDC16	YKL022C	YLR412C-A	Q3E742	68 aa		4.92	□□□□□ -1.62
CDC16	YKL022C	TAD3	Q9URQ3	322 aa		4.92	□□□□□ -1.62
CDC16	YKL022C	MDS3	P53094	1487 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	ATP5	P09457	212 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	VMA7	P39111	118 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	YGR039W	P53225	103 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	ATO3	Q12359	275 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	SPT14	P32363	452 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	PAN3	P36102	679 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC16	YKL022C	MRPL24	P36525	258 aa	Predicted RBP	4.91	□□□□□ -1.62
CDC16	YKL022C	VTC1	P40046	129 aa	RIP-Chip data	4.91	□□□□□ -1.62	not detected
CDC16	YKL022C	TIM13	P53299	105 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	LDB18	Q07887	179 aa		4.91	□□□□□ -1.62
CDC16	YKL022C	TFC1	P32367	649 aa		4.9	□□□□□ -1.62
CDC16	YKL022C	ECM34	P38728	170 aa		4.9	□□□□□ -1.62
CDC16	YKL022C	YER181C	P40097	107 aa		4.9	□□□□□ -1.62
CDC16	YKL022C	FCY21	P40039	528 aa		4.9	□□□□□ -1.63
CDC16	YKL022C	FCF1	Q05498	189 aa	Predicted RBP	4.9	□□□□□ -1.63
CDC16	YKL022C	YIR021W-A	Q3E739	70 aa		4.9	□□□□□ -1.63
CDC16	YKL022C	TIR1	P10863	254 aa		4.89	□□□□□ -1.63
CDC16	YKL022C	CGI121	Q03705	181 aa	Known RBP	4.89	□□□□□ -1.63
CDC16	YKL022C	VMA11	P32842	164 aa		4.89	□□□□□ -1.63
CDC16	YKL022C	YHR125W	P38831	101 aa		4.89	□□□□□ -1.63
CDC16	YKL022C	YLR099W-A	Q3E798	87 aa		4.89	□□□□□ -1.63
CDC16	YKL022C	CBP6	P07253	162 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC16	YKL022C	GSP1	P32835	219 aa	Known RBP	4.88	□□□□□ -1.63
CDC16	YKL022C	GSP2	P32836	220 aa	Known RBP	4.88	□□□□□ -1.63
CDC16	YKL022C	FYV4	P38783	130 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC16	YKL022C	RSM27	P53305	110 aa		4.88	□□□□□ -1.63
CDC16	YKL022C	PTC1	P35182	281 aa		4.88	□□□□□ -1.63
CDC16	YKL022C	YOR289W	Q12012	251 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC16	YKL022C	TIM9	O74700	87 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	PHO85	P17157	305 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	YCR101C	P25607	182 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	LHP1	P33399	275 aa	Known RBP	4.87	□□□□□ -1.63
CDC16	YKL022C	YJL218W	P40892	196 aa	Known RBP	4.87	□□□□□ -1.63
CDC16	YKL022C	MRPS16	Q02608	121 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	HYM1	P32464	399 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	CTR2	P38865	189 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	YER134C	P40081	178 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	SMD1	Q02260	146 aa	Predicted RBP	4.87	□□□□□ -1.63
CDC16	YKL022C	FYV12	Q08559	129 aa		4.87	□□□□□ -1.63
CDC16	YKL022C	RAD10	P06838	210 aa		4.86	□□□□□ -1.63
CDC16	YKL022C	AYR1	P40471	297 aa		4.86	□□□□□ -1.63
CDC16	YKL022C	SPC3	Q12133	184 aa		4.86	□□□□□ -1.63
CDC16	YKL022C	FMP49	A0A023PZB3	126 aa		4.86	□□□□□ -1.63
CDC16	YKL022C	YAR023C	D6VPM8	179 aa		4.86	□□□□□ -1.63
CDC16	YKL022C	YDR274C	P87283	123 aa		4.86	□□□□□ -1.63
CDC16	YKL022C	APS2	Q00381	147 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms