RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YDC1Q02896 317 aa1.6□□□□□ -2.15
NIC96YFR002W GRH1Q04410 372 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W NIP7Q08962 181 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W CDC7P06243 507 aa1.6□□□□□ -2.15
NIC96YFR002W SCL1P21243 252 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W TRX3P25372 127 aa1.6□□□□□ -2.15
NIC96YFR002W PTM1P32857 523 aa1.6□□□□□ -2.15
NIC96YFR002W YPT52P36018 234 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W TRM7P38238 310 aaKnown RBP1.6□□□□□ -2.15
NIC96YFR002W ILM1P47155 203 aa1.6□□□□□ -2.15
NIC96YFR002W DID2P69771 204 aa1.6□□□□□ -2.15
NIC96YFR002W SMD1Q02260 146 aaPredicted RBP1.6□□□□□ -2.15
NIC96YFR002W ARR2Q06597 130 aa1.6□□□□□ -2.15
NIC96YFR002W YLR036CQ07986 203 aa1.6□□□□□ -2.15
NIC96YFR002W HRT1Q08273 121 aa1.6□□□□□ -2.15
NIC96YFR002W NOT5Q12514 560 aaPredicted RBP1.6□□□□□ -2.15
NIC96YFR002W PET20Q99373 253 aa1.6□□□□□ -2.15
NIC96YFR002W MEC1P38111 2368 aa1.59□□□□□ -2.15
NIC96YFR002W YLR462WO13556 202 aa1.59□□□□□ -2.15
NIC96YFR002W DPM1P14020 267 aaKnown RBP1.59□□□□□ -2.15
NIC96YFR002W ERG24P32462 438 aaKnown RBP1.59□□□□□ -2.15
NIC96YFR002W SFC1P33303 322 aa1.59□□□□□ -2.15
NIC96YFR002W TKL2P33315 681 aa1.59□□□□□ -2.15
NIC96YFR002W RPF1P38805 295 aaKnown RBP1.59□□□□□ -2.15
NIC96YFR002W YEL075CP39972 122 aa1.59□□□□□ -2.15
NIC96YFR002W YGL235WP53071 178 aa1.59□□□□□ -2.15
NIC96YFR002W YNL010WP53981 241 aaKnown RBP1.59□□□□□ -2.15
NIC96YFR002W PEX12Q04370 399 aa1.59□□□□□ -2.15
NIC96YFR002W MGT1P26188 188 aa1.59□□□□□ -2.16
NIC96YFR002W MRPL15P36523 253 aa1.59□□□□□ -2.16
NIC96YFR002W DER1P38307 211 aa1.59□□□□□ -2.16
NIC96YFR002W DOG2P38773 246 aa1.59□□□□□ -2.16
NIC96YFR002W NVJ1P38881 321 aa1.59□□□□□ -2.16
NIC96YFR002W COG5P53951 403 aa1.59□□□□□ -2.16
NIC96YFR002W RRP17Q04031 235 aaPredicted RBP1.59□□□□□ -2.16
NIC96YFR002W LPP1Q04396 274 aa1.59□□□□□ -2.16
NIC96YFR002W YPL264CQ08980 353 aa1.59□□□□□ -2.16
NIC96YFR002W LSO2Q3E772 92 aaKnown RBP1.59□□□□□ -2.16
NIC96YFR002W HTL1Q9URQ5 78 aa1.59□□□□□ -2.16
NIC96YFR002W RPL25P04456 142 aaKnown RBP1.58□□□□□ -2.16
NIC96YFR002W SGA1P08019 549 aa1.58□□□□□ -2.16
NIC96YFR002W DSF1P0CX08 502 aa1.58□□□□□ -2.16
NIC96YFR002W YNR073CP0CX09 502 aa1.58□□□□□ -2.16
NIC96YFR002W CNB1P25296 175 aa1.58□□□□□ -2.16
NIC96YFR002W ABF2Q02486 183 aa1.58□□□□□ -2.16
NIC96YFR002W SLD7Q08457 257 aa1.58□□□□□ -2.16
NIC96YFR002W NSL1Q12143 216 aa1.58□□□□□ -2.16
NIC96YFR002W YLR050CQ12155 161 aaKnown RBP1.58□□□□□ -2.16
NIC96YFR002W MDM32Q12171 622 aa1.58□□□□□ -2.16
NIC96YFR002W PRR2Q12310 699 aa1.58□□□□□ -2.16
NIC96YFR002W GEP5Q12393 293 aa1.58□□□□□ -2.16
NIC96YFR002W SIR2P06700 562 aa1.58□□□□□ -2.16
NIC96YFR002W RNP1P32385 249 aa1.58□□□□□ -2.16
NIC96YFR002W UTP30P36144 274 aaKnown RBP1.58□□□□□ -2.16
NIC96YFR002W FMP23P38231 175 aa1.58□□□□□ -2.16
NIC96YFR002W EDC3P39998 551 aaKnown RBP1.58□□□□□ -2.16
NIC96YFR002W ICE2P40499 491 aa1.58□□□□□ -2.16
NIC96YFR002W GAS3Q03655 524 aa1.58□□□□□ -2.16
NIC96YFR002W FCF1Q05498 189 aaPredicted RBP1.58□□□□□ -2.16
NIC96YFR002W PST1Q12355 444 aa1.58□□□□□ -2.16
NIC96YFR002W RDI1Q12434 202 aa1.58□□□□□ -2.16
NIC96YFR002W TDA8Q6B2U8 126 aa1.58□□□□□ -2.16
NIC96YFR002W ISD11Q6Q560 94 aa1.58□□□□□ -2.16
NIC96YFR002W YBR056W-AI2HB52 66 aa1.57□□□□□ -2.16
NIC96YFR002W UBC8P28263 218 aa1.57□□□□□ -2.16
NIC96YFR002W SEC17P32602 292 aa1.57□□□□□ -2.16
NIC96YFR002W YKL102CP34249 101 aa1.57□□□□□ -2.16
NIC96YFR002W AST2P39945 430 aaKnown RBP1.57□□□□□ -2.16
NIC96YFR002W LSM4P40070 187 aaKnown RBP1.57□□□□□ -2.16
NIC96YFR002W YIL059CP40520 121 aa1.57□□□□□ -2.16
NIC96YFR002W ARP3P47117 449 aaKnown RBP1.57□□□□□ -2.16
NIC96YFR002W HSK3P69852 69 aa1.57□□□□□ -2.16
NIC96YFR002W YFR032C-BQ8TGU2 87 aa1.57□□□□□ -2.16
NIC96YFR002W YEL009C-AA0A023PZF2 135 aa1.57□□□□□ -2.16
NIC96YFR002W YPR170W-BP0C5R9 85 aa1.57□□□□□ -2.16
NIC96YFR002W FCY2P17064 533 aa1.57□□□□□ -2.16
NIC96YFR002W MAG1P22134 296 aaKnown RBP1.57□□□□□ -2.16
NIC96YFR002W YBR063CP38083 404 aa1.57□□□□□ -2.16
NIC96YFR002W RMD6P39975 231 aa1.57□□□□□ -2.16
NIC96YFR002W LSM1P47017 172 aaKnown RBP1.57□□□□□ -2.16
NIC96YFR002W NQM1P53228 333 aaPredicted RBP1.57□□□□□ -2.16
NIC96YFR002W YPL162CQ12042 273 aa1.57□□□□□ -2.16
NIC96YFR002W YOR342CQ12182 319 aa1.57□□□□□ -2.16
NIC96YFR002W BBP1Q12365 385 aa1.57□□□□□ -2.16
NIC96YFR002W YDL085C-AQ3E7B7 68 aaKnown RBP1.57□□□□□ -2.16
NIC96YFR002W HFA1P32874 2273 aa1.56□□□□□ -2.16
NIC96YFR002W MBF1O14467 151 aaKnown RBP1.56□□□□□ -2.16
NIC96YFR002W MAK31P23059 88 aa1.56□□□□□ -2.16
NIC96YFR002W YCR023CP25351 611 aa1.56□□□□□ -2.16
NIC96YFR002W MDH3P32419 343 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
NIC96YFR002W RCN1P36054 211 aa1.56□□□□□ -2.16
NIC96YFR002W SRP102P36057 244 aaPredicted RBP1.56□□□□□ -2.16
NIC96YFR002W YJL144WP47009 104 aa1.56□□□□□ -2.16
NIC96YFR002W SBH2P52871 88 aa1.56□□□□□ -2.16
NIC96YFR002W YML108WQ03759 105 aa1.56□□□□□ -2.16
NIC96YFR002W YDR249CQ03787 373 aa1.56□□□□□ -2.16
NIC96YFR002W YPR127WQ06494 345 aa1.56□□□□□ -2.16
NIC96YFR002W YPL257WQ08974 193 aa1.56□□□□□ -2.16
NIC96YFR002W YLR053CQ12026 108 aa1.56□□□□□ -2.16
NIC96YFR002W YOR020W-AQ3E824 90 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms