RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W DGK1Q12382 290 aa3.54□□□□□ -1.84
UBC6YER100W BUB2P26448 306 aaPredicted RBP3.53□□□□□ -1.84
UBC6YER100W KDX1P36005 433 aa3.53□□□□□ -1.84
UBC6YER100W YBR285WP38354 144 aa3.53□□□□□ -1.84
UBC6YER100W SPO73P40031 143 aa3.53□□□□□ -1.84
UBC6YER100W GPI14P47088 403 aaKnown RBP3.53□□□□□ -1.84
UBC6YER100W TTI2P47168 421 aa3.53□□□□□ -1.84
UBC6YER100W YDR476CQ03362 224 aa3.53□□□□□ -1.84
UBC6YER100W SPG3Q04398 127 aaPredicted RBP3.53□□□□□ -1.84
UBC6YER100W NAT3Q06504 195 aa3.53□□□□□ -1.84
UBC6YER100W PDR18P53756 1333 aa3.52□□□□□ -1.85
UBC6YER100W YAR023CD6VPM8 179 aa3.52□□□□□ -1.85
UBC6YER100W MIG1P27705 504 aa3.52□□□□□ -1.85
UBC6YER100W SHE2P36068 246 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
UBC6YER100W PAN3P36102 679 aaPredicted RBP3.52□□□□□ -1.85
UBC6YER100W SLM6P38343 150 aa3.52□□□□□ -1.85
UBC6YER100W YGL101WP53144 215 aa3.52□□□□□ -1.85
UBC6YER100W YDR274CP87283 123 aa3.52□□□□□ -1.85
UBC6YER100W FSF1Q12029 327 aaKnown RBP3.52□□□□□ -1.85
UBC6YER100W YML100W-AQ8TGT0 57 aa3.52□□□□□ -1.85
UBC6YER100W PBI2P0CT04 75 aaKnown RBP3.51□□□□□ -1.85
UBC6YER100W PET54P10834 293 aa3.51□□□□□ -1.85
UBC6YER100W SOK1P40317 901 aa3.51□□□□□ -1.85
UBC6YER100W YFL019CP43576 117 aa3.51□□□□□ -1.85
UBC6YER100W YGR219WP53307 113 aa3.51□□□□□ -1.85
UBC6YER100W PKR1Q03880 122 aaKnown RBP3.51□□□□□ -1.85
UBC6YER100W SPC2Q04969 178 aa3.51□□□□□ -1.85
UBC6YER100W YOL014WQ08110 124 aa3.51□□□□□ -1.85
UBC6YER100W UBI4P0CG63 381 aaKnown RBP3.5□□□□□ -1.85
UBC6YER100W NUF2P33895 451 aa3.5□□□□□ -1.85
UBC6YER100W SDH4P37298 181 aa3.5□□□□□ -1.85
UBC6YER100W YJR146WP47174 117 aa3.5□□□□□ -1.85
UBC6YER100W DAS2Q12084 232 aa3.5□□□□□ -1.85
UBC6YER100W YDL012CQ12489 107 aa3.5□□□□□ -1.85
UBC6YER100W VTC1P40046 129 aaRIP-Chip data3.49□□□□□ -1.85not detected
UBC6YER100W SOL1P50278 321 aa3.49□□□□□ -1.85
UBC6YER100W VPS71Q03433 280 aa3.49□□□□□ -1.85
UBC6YER100W THI74Q04083 370 aa3.49□□□□□ -1.85
UBC6YER100W CLB6P32943 380 aa3.48□□□□□ -1.85
UBC6YER100W YET1P35723 206 aa3.48□□□□□ -1.85
UBC6YER100W POP7P38291 140 aa3.48□□□□□ -1.85
UBC6YER100W FCY21P40039 528 aa3.48□□□□□ -1.85
UBC6YER100W YNL200CP40165 246 aaKnown RBP3.48□□□□□ -1.85
UBC6YER100W RPL33BP41056 107 aaKnown RBP3.48□□□□□ -1.85
UBC6YER100W YNR062CP53748 327 aa3.48□□□□□ -1.85
UBC6YER100W LSM3P57743 89 aaKnown RBP3.48□□□□□ -1.85
UBC6YER100W CCH1P50077 2039 aa3.48□□□□□ -1.85
UBC6YER100W APQ12P40532 138 aa3.47□□□□□ -1.85
UBC6YER100W YJL144WP47009 104 aa3.47□□□□□ -1.85
UBC6YER100W DAD3P69850 94 aa3.47□□□□□ -1.85
UBC6YER100W YPR202WQ08993 238 aa3.47□□□□□ -1.85
UBC6YER100W VPS68Q12016 184 aa3.47□□□□□ -1.85
UBC6YER100W YIL177CP40434 1758 aa3.47□□□□□ -1.85
UBC6YER100W YJL225CP40889 1758 aa3.47□□□□□ -1.85
UBC6YER100W POR1P04840 283 aaKnown RBP3.46□□□□□ -1.86
UBC6YER100W UPS2P35200 230 aa3.46□□□□□ -1.86
UBC6YER100W YAP3P38749 330 aa3.46□□□□□ -1.86
UBC6YER100W IPI1P38803 334 aaPredicted RBP3.46□□□□□ -1.86
UBC6YER100W DLS1P40366 167 aa3.46□□□□□ -1.86
UBC6YER100W SLM2P53955 656 aa3.46□□□□□ -1.86
UBC6YER100W ATO3Q12359 275 aa3.46□□□□□ -1.86
UBC6YER100W IDP1P21954 428 aaKnown RBP3.45□□□□□ -1.86
UBC6YER100W TIR3P40552 269 aa3.45□□□□□ -1.86
UBC6YER100W MPC3P53311 146 aa3.45□□□□□ -1.86
UBC6YER100W YMR099CQ03161 297 aaKnown RBP3.45□□□□□ -1.86
UBC6YER100W MRPS8Q03799 155 aa3.45□□□□□ -1.86
UBC6YER100W EMC6Q12431 108 aa3.45□□□□□ -1.86
UBC6YER100W ATG40Q99325 256 aa3.45□□□□□ -1.86
UBC6YER100W YPR096CO13587 100 aa3.44□□□□□ -1.86
UBC6YER100W PEX34P25584 144 aa3.44□□□□□ -1.86
UBC6YER100W CSH1P38287 376 aa3.44□□□□□ -1.86
UBC6YER100W ERV15P38312 142 aa3.44□□□□□ -1.86
UBC6YER100W SVP26P38869 228 aa3.44□□□□□ -1.86
UBC6YER100W CIS3P47001 227 aa3.44□□□□□ -1.86
UBC6YER100W ORM1P53224 222 aa3.44□□□□□ -1.86
UBC6YER100W RAV2Q03956 351 aa3.44□□□□□ -1.86
UBC6YER100W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
UBC6YER100W YOR214CQ12282 236 aa3.44□□□□□ -1.86
UBC6YER100W RAS2P01120 322 aaKnown RBP3.43□□□□□ -1.86
UBC6YER100W RPL2AP0CX45 254 aaKnown RBP3.43□□□□□ -1.86
UBC6YER100W RPL2BP0CX46 254 aaKnown RBP3.43□□□□□ -1.86
UBC6YER100W TIR1P10863 254 aa3.43□□□□□ -1.86
UBC6YER100W PEX4P29340 183 aa3.43□□□□□ -1.86
UBC6YER100W NSA2P40078 261 aaKnown RBP3.43□□□□□ -1.86
UBC6YER100W GLR1P41921 483 aaKnown RBP3.43□□□□□ -1.86
UBC6YER100W RBL2P48606 106 aaKnown RBP3.43□□□□□ -1.86
UBC6YER100W BOL2P53082 120 aa3.43□□□□□ -1.86
UBC6YER100W YGR042WP53227 271 aa3.43□□□□□ -1.86
UBC6YER100W TIM13P53299 105 aa3.43□□□□□ -1.86
UBC6YER100W PRM7Q12459 698 aa3.43□□□□□ -1.86
UBC6YER100W STP22P25604 385 aa3.42□□□□□ -1.86
UBC6YER100W FYV4P38783 130 aaPredicted RBP3.42□□□□□ -1.86
UBC6YER100W GIM4P40005 111 aaKnown RBP3.42□□□□□ -1.86
UBC6YER100W ERJ5P43613 295 aaPredicted RBP3.42□□□□□ -1.86
UBC6YER100W EAF6P47128 113 aa3.42□□□□□ -1.86
UBC6YER100W HHT1P61830 136 aa3.42□□□□□ -1.86
UBC6YER100W YMR295CQ03559 197 aa3.42□□□□□ -1.86
UBC6YER100W SHH3Q04487 196 aa3.42□□□□□ -1.86
UBC6YER100W RDS3Q06835 107 aaPredicted RBP3.42□□□□□ -1.86
UBC6YER100W RPL30P14120 105 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms