RNA–Protein interactions for RNA: YDR411C

DFM1, Transcript of Endoplasmic reticulum (ER) localized protein, yeast

Gene DFM1, Length 1,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DFM1	YDR411C	FSH2	Q05015	223 aa		4.58	□□□□□ -1.68
DFM1	YDR411C	PRM3	Q08931	133 aa		4.58	□□□□□ -1.68
DFM1	YDR411C	RKI1	Q12189	258 aa		4.58	□□□□□ -1.68
DFM1	YDR411C	YBR255C-A	Q3E776	120 aa		4.58	□□□□□ -1.68
DFM1	YDR411C	SOD1	P00445	154 aa	Known RBP	4.57	□□□□□ -1.68
DFM1	YDR411C	QCR2	P07257	368 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	MRPL38	P35996	138 aa	Predicted RBP	4.57	□□□□□ -1.68
DFM1	YDR411C	RFC2	P40348	353 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	LST8	P41318	303 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	ARP3	P47117	449 aa	Known RBP	4.57	□□□□□ -1.68
DFM1	YDR411C	NIF3	P53081	288 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	IRC23	Q08416	157 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	YNG1	Q08465	219 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	FEX2	Q08991	375 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	ATG5	Q12380	294 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	YJR112W-A	Q3E743	109 aa		4.57	□□□□□ -1.68
DFM1	YDR411C	LSM12	P38828	187 aa	Known RBP	4.56	□□□□□ -1.68
DFM1	YDR411C	SYG1	P40528	902 aa		4.56	□□□□□ -1.68
DFM1	YDR411C	YJR012C	P47087	207 aa		4.56	□□□□□ -1.68
DFM1	YDR411C	YGR219W	P53307	113 aa		4.56	□□□□□ -1.68
DFM1	YDR411C	CAB4	P53332	305 aa		4.56	□□□□□ -1.68
DFM1	YDR411C	YMR181C	Q03231	154 aa		4.56	□□□□□ -1.68
DFM1	YDR411C	TDH1	P00360	332 aa	Known RBP	4.55	□□□□□ -1.68
DFM1	YDR411C	NHP6B	P11633	99 aa	Known RBP	4.55	□□□□□ -1.68
DFM1	YDR411C	YCR016W	P25617	290 aa	Known RBP	4.55	□□□□□ -1.68
DFM1	YDR411C	MRP17	P28778	131 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	MRPL3	P36516	390 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	ERV15	P38312	142 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	YPT31	P38555	223 aa	Known RBP	4.55	□□□□□ -1.68
DFM1	YDR411C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	RIP-Chip
DFM1	YDR411C	YNL194C	P40169	301 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	YGR050C	P53231	118 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	ENV7	Q12003	364 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	YCT1	Q12235	531 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	RDI1	Q12434	202 aa		4.55	□□□□□ -1.68
DFM1	YDR411C	TPI1	P00942	248 aa	Known RBP	4.54	□□□□□ -1.68
DFM1	YDR411C	TRP4	P07285	380 aa	Predicted RBP	4.54	□□□□□ -1.68
DFM1	YDR411C	PET494	P07390	489 aa	Predicted RBP	4.54	□□□□□ -1.68
DFM1	YDR411C	SPS2	P08459	502 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	ERV1	P27882	189 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	MIC12	P38341	106 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	YAR068W	P39564	161 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	YKE4	P40544	346 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	GPG1	P53130	126 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	SSU72	P53538	206 aa	Predicted RBP	4.54	□□□□□ -1.68
DFM1	YDR411C	PAM18	Q07914	168 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	FEX1	Q08913	375 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	RAD28	Q12021	506 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	ATG31	Q12421	196 aa		4.54	□□□□□ -1.68
DFM1	YDR411C	MDM10	P18409	493 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	AUA1	P32450	94 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	SUA5	P32579	426 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	PDC2	P32896	925 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	YBR184W	P38299	523 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	FLO5	P38894	1075 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	ARO8	P53090	500 aa	Known RBP	4.53	□□□□□ -1.68
DFM1	YDR411C	DUO1	P53168	247 aa	Known RBP	4.53	□□□□□ -1.68
DFM1	YDR411C	MSO1	P53604	210 aa	Known RBP	4.53	□□□□□ -1.68
DFM1	YDR411C	ACT1	P60010	375 aa	Known RBP	4.53	□□□□□ -1.68
DFM1	YDR411C	VPS28	Q02767	242 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	YGL258W-A	Q3E740	77 aa		4.53	□□□□□ -1.68
DFM1	YDR411C	RPS8A	P0CX39	200 aa	Known RBP	4.52	□□□□□ -1.69
DFM1	YDR411C	RPS8B	P0CX40	200 aa	Known RBP	4.52	□□□□□ -1.69
DFM1	YDR411C	SDH4	P37298	181 aa		4.52	□□□□□ -1.69
DFM1	YDR411C	YBR242W	P38331	238 aa		4.52	□□□□□ -1.69
DFM1	YDR411C	MRPL49	P40858	161 aa	Predicted RBP	4.52	□□□□□ -1.69
DFM1	YDR411C	CPD1	P53314	239 aa		4.52	□□□□□ -1.69
DFM1	YDR411C	MRPS16	Q02608	121 aa		4.52	□□□□□ -1.69
DFM1	YDR411C	DYN2	Q02647	92 aa		4.52	□□□□□ -1.69
DFM1	YDR411C	GRH1	Q04410	372 aa	Known RBP	4.52	□□□□□ -1.69
DFM1	YDR411C	PEX10	Q05568	337 aa		4.52	□□□□□ -1.69
DFM1	YDR411C	TAR1	Q8TGM6	124 aa		4.52	□□□□□ -1.69
DFM1	YDR411C	PUT1	P09368	476 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	IMD2	P38697	523 aa	Known RBP	4.51	□□□□□ -1.69
DFM1	YDR411C	DOG2	P38773	246 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	DOG1	P38774	246 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	CAX4	P53223	239 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	SWT21	P53873	357 aa	Predicted RBP	4.51	□□□□□ -1.69
DFM1	YDR411C	EST3	Q03096	181 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	YLR281C	Q05863	155 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	FRQ1	Q06389	190 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	YOR352W	Q08816	343 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	PRM4	Q12498	284 aa		4.51	□□□□□ -1.69
DFM1	YDR411C	ARG80	P07249	177 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	URA5	P13298	226 aa	Known RBP	4.5	□□□□□ -1.69
DFM1	YDR411C	MRPL33	P20084	86 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	YKL162C	P36052	402 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	YBL071C	P38185	102 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	MPC2	P38857	129 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	YPI1	P43587	155 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	ECM27	P47144	725 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	YDR274C	P87283	123 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	LRS4	Q04087	347 aa	Known RBP	4.5	□□□□□ -1.69
DFM1	YDR411C	YLR224W	Q05947	369 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	YPR013C	Q12145	317 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	YPS3	Q12303	508 aa		4.5	□□□□□ -1.69
DFM1	YDR411C	COX2	P00410	251 aa		4.49	□□□□□ -1.69
DFM1	YDR411C	GRX2	P17695	143 aa	Known RBP	4.49	□□□□□ -1.69
DFM1	YDR411C	SEC22	P22214	214 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms