RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOB1	YDR110W	RNP1	P32385	249 aa		4.66	□□□□□ -1.66
FOB1	YDR110W	FMP46	P36141	133 aa	Known RBP	4.66	□□□□□ -1.66
FOB1	YDR110W	MRP21	P38175	177 aa		4.66	□□□□□ -1.66
FOB1	YDR110W	TIF34	P40217	347 aa	Known RBP	4.66	□□□□□ -1.66
FOB1	YDR110W	HRI1	Q05905	244 aa	Known RBP	4.66	□□□□□ -1.66
FOB1	YDR110W	YOR186W	Q08560	144 aa		4.66	□□□□□ -1.66
FOB1	YDR110W	BOL1	Q3E793	110 aa		4.66	□□□□□ -1.66
FOB1	YDR110W	YNL277W-A	Q3E7Z0	62 aa		4.66	□□□□□ -1.66
FOB1	YDR110W	YCR007C	P25354	239 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	SHB17	P36136	271 aa	Known RBP	4.65	□□□□□ -1.67
FOB1	YDR110W	DLS1	P40366	167 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	PAN6	P40459	309 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	APJ1	P53940	528 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	SML1	Q04964	104 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	AIM39	Q08223	395 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	MCA1	Q08601	432 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	YPS3	Q12303	508 aa		4.65	□□□□□ -1.67
FOB1	YDR110W	MPD1	Q12404	318 aa	Known RBP	4.65	□□□□□ -1.67
FOB1	YDR110W	MRPL39	P36533	70 aa		4.64	□□□□□ -1.67
FOB1	YDR110W	MED6	P38782	295 aa		4.64	□□□□□ -1.67
FOB1	YDR110W	YGL230C	P53074	147 aa		4.64	□□□□□ -1.67
FOB1	YDR110W	YGL034C	P53186	121 aa		4.64	□□□□□ -1.67
FOB1	YDR110W	FMP48	P53233	369 aa		4.64	□□□□□ -1.67
FOB1	YDR110W	VPS28	Q02767	242 aa		4.64	□□□□□ -1.67
FOB1	YDR110W	YBR063C	P38083	404 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	YHR140W	P38842	239 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	GTT1	P40582	234 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	FIP1	P45976	327 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	YNR062C	P53748	327 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	PGA1	P53896	198 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	YLR042C	Q07990	161 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	SPC3	Q12133	184 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	DGK1	Q12382	290 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	FAS2	P19097	1887 aa	Known RBP	4.63	□□□□□ -1.67
FOB1	YDR110W	MBF1	O14467	151 aa	Known RBP	4.63	□□□□□ -1.67
FOB1	YDR110W	RPS14A	P06367	137 aa	Known RBP	4.63	□□□□□ -1.67
FOB1	YDR110W	TIR1	P10863	254 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	YCR100C	P25606	316 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	SNC1	P31109	117 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	GPX1	P36014	167 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	OMA1	P36163	345 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	AVT5	P38176	459 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	MOH1	P38191	138 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	RPS14B	P39516	138 aa	Known RBP	4.63	□□□□□ -1.67
FOB1	YDR110W	RRT5	P43607	289 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	ARP3	P47117	449 aa	Known RBP	4.63	□□□□□ -1.67
FOB1	YDR110W	YGR050C	P53231	118 aa		4.63	□□□□□ -1.67
FOB1	YDR110W	TOM1	Q03280	3268 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	RPN13	O13563	156 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	AQY1	P0CD91	305 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	CPR1	P14832	162 aa	Known RBP	4.62	□□□□□ -1.67
FOB1	YDR110W	SPT14	P32363	452 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	TKL2	P33315	681 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	MBA1	P38300	278 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	PRE5	P40302	234 aa	Known RBP	4.62	□□□□□ -1.67
FOB1	YDR110W	TPC1	P53257	314 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	ERV29	P53337	310 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	NUP100	Q02629	959 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	RNH202	Q05635	350 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	YDL180W	Q12301	547 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	IZH2	Q12442	317 aa		4.62	□□□□□ -1.67
FOB1	YDR110W	REP2	P03872	296 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	Q0255	P03881	472 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	MAG1	P22134	296 aa	Known RBP	4.61	□□□□□ -1.67
FOB1	YDR110W	MRPL20	P22354	195 aa	Predicted RBP	4.61	□□□□□ -1.67
FOB1	YDR110W	ATS1	P31386	333 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	RCN1	P36054	211 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	YEL075C	P39972	122 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	SNU13	P39990	126 aa	Known RBP	4.61	□□□□□ -1.67
FOB1	YDR110W	YER189W	P40104	122 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	YIL024C	P40543	189 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	OST1	P41543	476 aa	Known RBP	4.61	□□□□□ -1.67
FOB1	YDR110W	MRH4	P53166	561 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	YNL234W	P53857	426 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	CTL1	Q03220	320 aa	Known RBP	4.61	□□□□□ -1.67
FOB1	YDR110W	HUT1	Q12520	339 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	TSC3	Q3E790	80 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	HKR1	P41809	1802 aa		4.61	□□□□□ -1.67
FOB1	YDR110W	BI2	P03873	423 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	YAR066W	P0CX18	203 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	YHR214W	P0CX19	203 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	YBR090C	P38253	122 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	MTC6	P38849	526 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	GGC1	P38988	300 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	NRM1	P53718	249 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	FMP41	P53889	259 aa	Known RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	YMR099C	Q03161	297 aa	Known RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	GRH1	Q04410	372 aa	Known RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	MIM1	Q08176	113 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	RPL15A	P05748	204 aa	Known RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	CKS1	P20486	150 aa	Known RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	ALG9	P53868	555 aa	Known RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	YNL010W	P53981	241 aa	Known RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	RPL15B	P54780	204 aa	Predicted RBP	4.6	□□□□□ -1.67
FOB1	YDR110W	ELC1	Q03071	99 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	TIM18	Q08749	192 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	YCR024C-B	Q3E7Z8	88 aa		4.6	□□□□□ -1.67
FOB1	YDR110W	YCR025C	P25352	136 aa		4.59	□□□□□ -1.67
FOB1	YDR110W	LDB16	P25587	256 aa		4.59	□□□□□ -1.67
FOB1	YDR110W	SRP21	P32342	167 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms