RNA–Protein interactions for RNA: YBL005W-A

YBL005W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBL005W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBL005W-AYBL005W-A BNA7Q04066 261 aa2.14□□□□□ -2.07
YBL005W-AYBL005W-A GRH1Q04410 372 aaKnown RBP2.14□□□□□ -2.07
YBL005W-AYBL005W-A SPC2Q04969 178 aa2.14□□□□□ -2.07
YBL005W-AYBL005W-A YMR226CQ05016 267 aaKnown RBP2.14□□□□□ -2.07
YBL005W-AYBL005W-A YPL257WQ08974 193 aa2.14□□□□□ -2.07
YBL005W-AYBL005W-A HTL1Q9URQ5 78 aa2.14□□□□□ -2.07
YBL005W-AYBL005W-A TRX3P25372 127 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A TFC1P32367 649 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A ASF2P32448 525 aaPredicted RBP2.13□□□□□ -2.07
YBL005W-AYBL005W-A PTC1P35182 281 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A CBT1P36038 271 aaPredicted RBP2.13□□□□□ -2.07
YBL005W-AYBL005W-A MRPL17P36528 281 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A YER188WP40103 239 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A PEX17P40155 199 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A ARC15P40518 154 aaRIP-Chip data2.13□□□□□ -2.07not detected
YBL005W-AYBL005W-A CAT5P41735 233 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A CIS3P47001 227 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A APS3P47064 194 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A PAC10P48363 199 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A RAD17P48581 401 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A BRR6P53062 197 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A CAB4P53332 305 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A GAS3Q03655 524 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A YLR036CQ07986 203 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A MHF2Q3E829 80 aa2.13□□□□□ -2.07
YBL005W-AYBL005W-A FBA1P14540 359 aaKnown RBP2.12□□□□□ -2.07
YBL005W-AYBL005W-A URA6P15700 204 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A TAH1P25638 111 aaPredicted RBP2.12□□□□□ -2.07
YBL005W-AYBL005W-A SEC17P32602 292 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A SUI1P32911 108 aaKnown RBP2.12□□□□□ -2.07
YBL005W-AYBL005W-A YNL194CP40169 301 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A YGR201CP42936 225 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A PRM10P42946 383 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A RPA43P46669 326 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A YJR056CP47115 236 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A NUP57P48837 541 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A MGA1P53050 456 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A ALG13P53178 202 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A CGR1P53188 120 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A DID2P69771 204 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A YMR279CQ03263 540 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A MIX17Q03667 156 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A YML108WQ03759 105 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A HEM25Q07534 307 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A YOR214CQ12282 236 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A MHT1Q12525 324 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A YOR020W-AQ3E824 90 aa2.12□□□□□ -2.07
YBL005W-AYBL005W-A YHR139C-AO13536 103 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A RPL28P02406 149 aaKnown RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A Q0255P03881 472 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A CDC36P06100 191 aaPredicted RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A ADH3P07246 375 aaKnown RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A DSF1P0CX08 502 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A YNR073CP0CX09 502 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A CLB6P32943 380 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A SRY1P36007 326 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A RPF1P38805 295 aaKnown RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A YHR125WP38831 101 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A RIO2P40160 425 aaKnown RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A HPM1P40481 377 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A MRPL49P40858 161 aaPredicted RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A FAR7P43592 221 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A CWC23P52868 283 aaPredicted RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A ERV29P53337 310 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A YNL033WP53964 284 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A YNL019CP53975 284 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A ABF2Q02486 183 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A NIP7Q08962 181 aaKnown RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A JLP1Q12358 412 aa2.11□□□□□ -2.07
YBL005W-AYBL005W-A LSO2Q3E772 92 aaKnown RBP2.11□□□□□ -2.07
YBL005W-AYBL005W-A UBR1P19812 1950 aa2.1□□□□□ -2.07
YBL005W-AYBL005W-A KSS1P14681 368 aa2.1□□□□□ -2.07
YBL005W-AYBL005W-A MER1P16523 270 aa2.1□□□□□ -2.07
YBL005W-AYBL005W-A RPS1BP23248 255 aaKnown RBP2.1□□□□□ -2.07
YBL005W-AYBL005W-A YOR062CP36025 268 aa2.1□□□□□ -2.07
YBL005W-AYBL005W-A MTW1P39731 289 aa2.1□□□□□ -2.07
YBL005W-AYBL005W-A ADO1P47143 340 aaKnown RBP2.1□□□□□ -2.07
YBL005W-AYBL005W-A YJR146WP47174 117 aa2.1□□□□□ -2.07
YBL005W-AYBL005W-A RBL2P48606 106 aaKnown RBP2.1□□□□□ -2.07
YBL005W-AYBL005W-A GPI11Q06636 219 aa2.1□□□□□ -2.07
YBL005W-AYBL005W-A YDR157WA0A023PZE8 133 aa2.09□□□□□ -2.08
YBL005W-AYBL005W-A SCO1P23833 295 aa2.09□□□□□ -2.08
YBL005W-AYBL005W-A SCM4P32564 187 aa2.09□□□□□ -2.08
YBL005W-AYBL005W-A RPS20P38701 121 aaKnown RBP2.09□□□□□ -2.08
YBL005W-AYBL005W-A AIM2P39721 246 aa2.09□□□□□ -2.08
YBL005W-AYBL005W-A PDS1P40316 373 aaPredicted RBP2.09□□□□□ -2.08
YBL005W-AYBL005W-A GVP36P40531 326 aaKnown RBP2.09□□□□□ -2.08
YBL005W-AYBL005W-A SMD3P43321 101 aaKnown RBP2.09□□□□□ -2.08
YBL005W-AYBL005W-A ALB1P47019 175 aaPredicted RBP2.09□□□□□ -2.08
YBL005W-AYBL005W-A YGR026WP53217 278 aa2.09□□□□□ -2.08
YBL005W-AYBL005W-A YLR460CP54007 376 aa2.09□□□□□ -2.08
YBL005W-AYBL005W-A MRPS17Q03246 237 aaPredicted RBP2.09□□□□□ -2.08
YBL005W-AYBL005W-A MHF1Q3E835 90 aa2.09□□□□□ -2.08
YBL005W-AYBL005W-A VPS13Q07878 3144 aa2.08□□□□□ -2.08
YBL005W-AYBL005W-A CDC28P00546 298 aaKnown RBP2.08□□□□□ -2.08
YBL005W-AYBL005W-A YSF3P0C074 85 aaPredicted RBP2.08□□□□□ -2.08
YBL005W-AYBL005W-A PET9P18239 318 aaKnown RBP2.08□□□□□ -2.08
YBL005W-AYBL005W-A UBC8P28263 218 aa2.08□□□□□ -2.08
YBL005W-AYBL005W-A SKG1P36169 355 aa2.08□□□□□ -2.08
YBL005W-AYBL005W-A PDX3P38075 228 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms