RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 DKK4Q9UBT3 224 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 BRPF3Q9ULD4 1205 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 YIPF1Q9Y548 306 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 APC2O95996 2303 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 ACACAQ13085 2346 aa12.09□□□□□ -0.47
PTP4A1-207ENST00000639568 CYP3A7-CYP3A51PA0A087WV96 503 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 EDIL3O43854 480 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 MARCH6O60337 910 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 ALDH1A2O94788 518 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PRAMEF12O95522 483 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 GLRA2P23416 452 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 CYP3A7P24462 503 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 CHMLP26374 656 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 GABRR2P28476 465 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 ARL2P36404 184 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PTGER3P43115 390 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PPP2R5CQ13362 524 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 DUOXA1Q1HG43 343 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 CC2D1AQ6P1N0 951 aaPredicted RBP12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 TMC8Q8IU68 726 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 MINDY1Q8N5J2 469 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 CNOT6LQ96LI5 555 aaKnown RBP12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 CAMK1GQ96NX5 476 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 GCNAQ96QF7 691 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 FAM83CQ9BQN1 747 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 LRRC3Q9BY71 257 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PDZD7Q9H5P4 517 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 CLMPQ9H6B4 373 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 TASP1Q9H6P5 420 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 FSCN3Q9NQT6 498 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 XPNPEP1Q9NQW7 623 aa12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 DDX25Q9UHL0 483 aaKnown RBP12.08□□□□□ -0.48
PTP4A1-207ENST00000639568 PODXLO00592 558 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 ZBTB39O15060 712 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 SGSM2O43147 1006 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 SH3BP5O60239 455 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 DGAT1O75907 488 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 CD59P13987 128 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 U2AF2P26368 475 aaKnown RBP eCLIP12.07□□□□□ -0.482e-69■□□□□ 9.9
PTP4A1-207ENST00000639568 MARCKSP29966 332 aaPredicted RBP12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 CDC27P30260 824 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 WEE1P30291 646 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 HOXD12P35452 270 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 CYP4F3Q08477 520 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 SLC14A1Q13336 389 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 MRPL58Q14197 206 aaKnown RBP12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 TRIM68Q6AZZ1 485 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 GAREM2Q75VX8 874 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 RABEPKQ7Z6M1 372 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 ITIH5Q86UX2 942 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 RASSF3Q86WH2 238 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 TPH2Q8IWU9 490 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 SMC5Q8IY18 1101 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 CHFRQ96EP1 664 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 KIF2CQ99661 725 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 HNRNPABQ99729 332 aaKnown RBP12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 SMG9Q9H0W8 520 aaKnown RBP12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 POLMQ9NP87 494 aaPredicted RBP12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 HPS4Q9NQG7 708 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 SLC38A7Q9NVC3 462 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 RGL1Q9NZL6 768 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 ASB3Q9Y575 518 aa12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 ATXN2Q99700 1313 aaKnown RBP12.07□□□□□ -0.48
PTP4A1-207ENST00000639568 ASCC3Q8N3C0 2202 aaKnown RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 OTOL1A6NHN0 477 aaPredicted RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 SYPP08247 313 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 SERPINF2P08697 491 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 LIG1P18858 919 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 ITPKAP23677 461 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 ADD1P35611 737 aaKnown RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 AVPR1AP37288 418 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 NLRP5P59047 1200 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 BFSP1Q12934 665 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 DUSP4Q13115 394 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 BYSLQ13895 437 aaKnown RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 CTTNQ14247 550 aaKnown RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 EPHA7Q15375 998 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 SPDYCQ5MJ68 293 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 TOGARAM2Q6ZUX3 1019 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 DNAJB7Q7Z6W7 309 aaPredicted RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 CPA6Q8N4T0 437 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 MDGA1Q8NFP4 955 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 RLN3Q8WXF3 142 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 PGLYRP2Q96PD5 576 aa12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 POLR3FQ9H1D9 316 aaPredicted RBP12.06□□□□□ -0.48
PTP4A1-207ENST00000639568 PILRBQ9UKJ0 227 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms