RNA–Protein interactions for RNA: ENST00000638606.1

KCNMA1-241, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-241ENST00000638606 TMEM237Q96Q45 408 aa13.67□□□□□ -0.22
KCNMA1-241ENST00000638606 CYP4F11Q9HBI6 524 aa13.67□□□□□ -0.22
KCNMA1-241ENST00000638606 SIX2Q9NPC8 291 aa13.67□□□□□ -0.22
KCNMA1-241ENST00000638606 DISP2A7MBM2 1401 aa13.67□□□□□ -0.22
KCNMA1-241ENST00000638606 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
KCNMA1-241ENST00000638606 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 A0A0A6YYK5 440 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 EXTL3O43909 919 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 C11orf63Q6NUN7 778 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 ANO5Q75V66 913 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 TRMT10CQ7L0Y3 403 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 ZNF606Q8WXB4 792 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 SGSM3Q96HU1 749 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 SCYL1Q96KG9 808 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 TTC1Q99614 292 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 FAM129AQ9BZQ8 928 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 C12orf65Q9H3J6 166 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 MYH15Q9Y2K3 1946 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 IGKV6D-41A0A0C4DH26 115 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 FAM47DPA6NHR8 397 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 EPHB1P54762 984 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 MRPS9P82933 396 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 SKOR1P84550 965 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 NME3Q13232 169 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 ZBTB41Q5SVQ8 909 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 CATSPER4Q7RTX7 472 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 OR5B17Q8NGF7 314 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.66□□□□□ -0.227e-7■■■■■ 73.9
KCNMA1-241ENST00000638606 XPO7Q9UIA9 1087 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 ARL2BPQ9Y2Y0 163 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 KAT6AQ92794 2004 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 LCA5LO95447 670 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 ITGB3P05106 788 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 GZMAP12544 262 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 TBXAS1P24557 533 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 ANXA13P27216 316 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 HIRAP54198 1017 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 RAD23BP54727 409 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 HYIQ5T013 277 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 RAPH1Q70E73 1250 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 KAT2BQ92831 832 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 NOD2Q9HC29 1040 aa13.66□□□□□ -0.22
KCNMA1-241ENST00000638606 MED7O43513 233 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 TTC4O95801 387 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 CCNE2O96020 404 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 SERPINB6P35237 376 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 PCNX4Q63HM2 1172 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 IL31Q6EBC2 164 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 ACTL9Q8TC94 416 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 SH3GL2Q99962 352 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 CEP41Q9BYV8 373 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 VPS11Q9H270 941 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 RBAK-RBAKDNI3L0D1 243 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 O00370 1275 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 CFLARO15519 480 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 TNFSF9P41273 254 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 CTCFP49711 727 aaPredicted RBP13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 OTUD4Q01804 1114 aaKnown RBP13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 CLEC16AQ2KHT3 1053 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 STYK1Q6J9G0 422 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 CEP120Q8N960 986 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 TMEM161BQ8NDZ6 487 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 BSNDQ8WZ55 320 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 NUDCD1Q96RS6 583 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 SLCO1B3Q9NPD5 702 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 CISHQ9NSE2 258 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 ANKEF1Q9NU02 776 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 VWA5AO00534 786 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 ITKQ08881 620 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 ENOSF1Q7L5Y1 443 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 C4orf19Q8IY42 314 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 DAW1Q8N136 415 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 DEPDC1BQ8WUY9 529 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 ATP2A3Q93084 1043 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 FHDC1Q9C0D6 1143 aaPredicted RBP13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 YIPF3Q9GZM5 350 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 POLIQ9UNA4 740 aa13.65□□□□□ -0.22
KCNMA1-241ENST00000638606 TULP2O00295 520 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 SLC4A1P02730 911 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 PECAM1P16284 738 aaPredicted RBP13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 BACE1P56817 501 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 PKN2Q16513 984 aaKnown RBP13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 DUPD1Q68J44 220 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 EFCAB12Q6NXP0 572 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 WNK4Q96J92 1243 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 UBXN6Q9BZV1 441 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 TXLNGQ9NUQ3 528 aa13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 NOP53Q9NZM5 478 aaKnown RBP13.65□□□□□ -0.23
KCNMA1-241ENST00000638606 PCDHA3Q9Y5H8 950 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms