RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 KRT18P05783 430 aaKnown RBP20.6■□□□□ 0.89
SMN2-215ENST00000628696 CCNE1P24864 410 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 AARSP49588 968 aaKnown RBP eCLIP20.6■□□□□ 0.89
SMN2-215ENST00000628696 NRLP54845 237 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 GPR17Q13304 367 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 PPP2R5DQ14738 602 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 KYAT1Q16773 422 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 ARL6IP4Q66PJ3 421 aaKnown RBP20.6■□□□□ 0.89
SMN2-215ENST00000628696 E2F7Q96AV8 911 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 RSPRY1Q96DX4 576 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 CALML4Q96GE6 196 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 REEP2Q9BRK0 252 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 DNAJC25Q9H1X3 360 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 ZHX3Q9H4I2 956 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 USP18Q9UMW8 372 aa20.6■□□□□ 0.89
SMN2-215ENST00000628696 GJB2P29033 226 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 UBA7P41226 1012 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 KPNA1P52294 538 aaPredicted RBP20.59■□□□□ 0.89
SMN2-215ENST00000628696 STXBP5Q5T5C0 1151 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 CENPPQ6IPU0 288 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 ARMCX5Q6P1M9 558 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 TMC8Q8IU68 726 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 ATAD1Q8NBU5 361 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 MSTO1Q9BUK6 570 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 LRRC3Q9BY71 257 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 GMEB2Q9UKD1 530 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 RAB23Q9ULC3 237 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
SMN2-215ENST00000628696 MTMR11A4FU01 709 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 SOAT2O75908 522 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 TYMPP19971 482 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 CCR3P51677 355 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 CDR1P51861 262 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 LILRA4P59901 499 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 MYBPC2Q14324 1141 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 RABEP1Q15276 862 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 LPAL2Q16609 132 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 SPATA1Q5VX52 437 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 JADE1Q6IE81 842 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 DNAJB7Q7Z6W7 309 aaPredicted RBP20.58■□□□□ 0.89
SMN2-215ENST00000628696 RASSF8Q8NHQ8 419 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 SENP8Q96LD8 212 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 TMEM209Q96SK2 561 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 IER2Q9BTL4 223 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 ATXN3LQ9H3M9 355 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 PARVGQ9HBI0 331 aa20.58■□□□□ 0.89
SMN2-215ENST00000628696 SLC38A8A6NNN8 435 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 DPYSL4O14531 572 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 CHRNB1P11230 501 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 ODC1P11926 461 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 TDGF1P13385 188 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 SDHBP21912 280 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 CXCL12P48061 93 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 SOX9P48436 509 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 MAMSTRQ6ZN01 415 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 ARID3BQ8IVW6 561 aaPredicted RBP20.57■□□□□ 0.88
SMN2-215ENST00000628696 TTC9BQ8N6N2 239 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 TTC8Q8TAM2 541 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 FAM200AQ8TCP9 573 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 TMX3Q96JJ7 454 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 AK8Q96MA6 479 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 TSPAN18Q96SJ8 248 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 ASB3Q9Y575 518 aa20.57■□□□□ 0.88
SMN2-215ENST00000628696 SCN1AP35498 2009 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 DNAH14Q0VDD8 3507 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 A0A0B4J269 797 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 ARNTLO00327 626 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 CHADO15335 359 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 TRAK2O60296 914 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 FAM189A1O60320 539 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 PIGRP01833 764 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 GABRR2P28476 465 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 SATB1Q01826 763 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 MCM6Q14566 821 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 C8orf34Q49A92 452 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 GPR158Q5T848 1215 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 C9orf57Q5W0N0 161 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 PRR23BQ6ZRT6 265 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 GAREM2Q75VX8 874 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 CD302Q8IX05 232 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 RBM12Q9NTZ6 932 aaKnown RBP20.56■□□□□ 0.88
SMN2-215ENST00000628696 CPSF3Q9UKF6 684 aaKnown RBP20.56■□□□□ 0.88
SMN2-215ENST00000628696 TCHHQ07283 1943 aa20.56■□□□□ 0.88
SMN2-215ENST00000628696 RALGAPA1Q6GYQ0 2036 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 SLC26A4O43511 780 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 TBCAO75347 108 aaKnown RBP20.55■□□□□ 0.88
SMN2-215ENST00000628696 ADRB2P07550 413 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 NFICP08651 508 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 ACOT2P49753 483 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 MLLT6P55198 1093 aaPredicted RBP20.55■□□□□ 0.88
SMN2-215ENST00000628696 LMNB2Q03252 620 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 FCHO2Q0JRZ9 810 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 LRRC32Q14392 662 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 TMEM132DQ14C87 1099 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 KARSQ15046 597 aaKnown RBP20.55■□□□□ 0.88
SMN2-215ENST00000628696 ARHGAP15Q53QZ3 475 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 SLC39A4Q6P5W5 647 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 ITIH5Q86UX2 942 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 LRRC15Q8TF66 581 aa20.55■□□□□ 0.88
SMN2-215ENST00000628696 KCNN1Q92952 543 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms