RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 NCANO14594 1321 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 ARNTLO00327 626 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 HRO43593 1189 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 GDF9O60383 454 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 FOXD2O60548 495 aaPredicted RBP8.53□□□□□ -1.04
CLK1-215ENST00000621181 MOSPD3O75425 235 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 LARGE1O95461 756 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 KCNE1P15382 129 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 EPHA5P54756 1037 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 MLLT6P55198 1093 aaPredicted RBP8.53□□□□□ -1.04
CLK1-215ENST00000621181 GUCY1B3Q02153 619 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 YWHAHQ04917 246 aaPredicted RBP8.53□□□□□ -1.04
CLK1-215ENST00000621181 DMWDQ09019 674 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 PTGDRQ13258 359 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 ZSCAN23Q3MJ62 389 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 IL31Q6EBC2 164 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 RNF19BQ6ZMZ0 732 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 Q6ZS52 159 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 LONP2Q86WA8 852 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 DDX12PQ92771 950 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 PGLYRP2Q96PD5 576 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 C8orf33Q9H7E9 229 aaPredicted RBP8.53□□□□□ -1.04
CLK1-215ENST00000621181 PTPRHQ9HD43 1115 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 KMT5AQ9NQR1 393 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 DDX19AQ9NUU7 478 aaKnown RBP8.53□□□□□ -1.04
CLK1-215ENST00000621181 ANKFY1Q9P2R3 1169 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 KIAA1024Q9UPX6 916 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 YIPF1Q9Y548 306 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 COL4A2P08572 1712 aa8.53□□□□□ -1.04
CLK1-215ENST00000621181 ESPNB1AK53 854 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 DPYSL4O14531 572 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 CHADO15335 359 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 HIP1RO75146 1068 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 MCF2P10911 925 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 CTHP32929 405 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 SOX9P48436 509 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 EPHB3P54753 998 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 PLD1Q13393 1074 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 ORC2Q13416 577 aaPredicted RBP8.52□□□□□ -1.04
CLK1-215ENST00000621181 GNL2Q13823 731 aaKnown RBP8.52□□□□□ -1.04
CLK1-215ENST00000621181 ECM1Q16610 540 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 AASDHQ4L235 1098 aaPredicted RBP8.52□□□□□ -1.04
CLK1-215ENST00000621181 MPZL3Q6UWV2 235 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 USP37Q86T82 979 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 ARID3BQ8IVW6 561 aaPredicted RBP8.52□□□□□ -1.04
CLK1-215ENST00000621181 SHKBP1Q8TBC3 707 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 DRC1Q96MC2 740 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 TMEM134Q9H6X4 195 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 ARHGAP28Q9P2N2 729 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 LRWD1Q9UFC0 647 aa8.52□□□□□ -1.04
CLK1-215ENST00000621181 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 PDCD11Q14690 1871 aaKnown RBP8.52□□□□□ -1.05
CLK1-215ENST00000621181 USP24Q9UPU5 2620 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 FRYQ5TBA9 3013 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 SPECC1L-ADORA2AF8WAN1 911 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 K7ESF4 209 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 PAPSS2O95340 614 aaPredicted RBP8.52□□□□□ -1.05
CLK1-215ENST00000621181 OR4Q2P0C623 313 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 MATR3P43243 847 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLK1-215ENST00000621181 ALDH1A3P47895 512 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 FCHO2Q0JRZ9 810 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 STRN3Q13033 797 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 NOLC1Q14978 699 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLK1-215ENST00000621181 DGKKQ5KSL6 1271 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 TTC38Q5R3I4 469 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 TXNDC11Q6PKC3 985 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 TAS1R3Q7RTX0 852 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 HAUS6Q7Z4H7 955 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 RALGPS2Q86X27 583 aaPredicted RBP8.52□□□□□ -1.05
CLK1-215ENST00000621181 GPIHBP1Q8IV16 184 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 FAM160A2Q8N612 972 aaPredicted RBP8.52□□□□□ -1.05
CLK1-215ENST00000621181 C12orf50Q8NA57 414 aaPredicted RBP8.52□□□□□ -1.05
CLK1-215ENST00000621181 TTC8Q8TAM2 541 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 SNX29Q8TEQ0 813 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 PDLIM2Q96JY6 352 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 ZFYVE19Q96K21 471 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 C8orf76Q96K31 380 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 RAB34Q9BZG1 259 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 SCUBE2Q9NQ36 999 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 GTSE1Q9NYZ3 720 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 TUBGCP4Q9UGJ1 667 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 DNM3Q9UQ16 869 aa8.52□□□□□ -1.05
CLK1-215ENST00000621181 TIMM13Q9Y5L4 95 aaPredicted RBP8.52□□□□□ -1.05
CLK1-215ENST00000621181 MYBPHLA2RUH7 354 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 SLC16A4O15374 487 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 PRPF40AO75400 957 aaKnown RBP8.51□□□□□ -1.05
CLK1-215ENST00000621181 TOM1L1O75674 476 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 PROZP22891 400 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 NASPP49321 788 aaPredicted RBP8.51□□□□□ -1.05
CLK1-215ENST00000621181 CCDC173Q0VFZ6 552 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 DUSP4Q13115 394 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 PON2Q15165 354 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 SLC10A6Q3KNW5 377 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 SEZ6Q53EL9 994 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 STXBP5Q5T5C0 1151 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 CAVIN1Q6NZI2 390 aaKnown RBP8.51□□□□□ -1.05
CLK1-215ENST00000621181 BEST2Q8NFU1 509 aa8.51□□□□□ -1.05
CLK1-215ENST00000621181 RSPRY1Q96DX4 576 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms