RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 KCNJ12Q14500 433 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 FAM200AQ8TCP9 573 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 HASPINQ8TF76 798 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 ADAM28Q9UKQ2 775 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 AGAP1Q9UPQ3 857 aa20.3■□□□□ 0.84
CCDC9-205ENST00000600117 SPTLC1O15269 473 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 LINC01565O15544 149 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 STX10O60499 249 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 GFRA3O60609 400 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 EEF1GP26641 437 aaKnown RBP20.29■□□□□ 0.84
CCDC9-205ENST00000600117 GTF2F1P35269 517 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC9-205ENST00000600117 MTIF2P46199 727 aaKnown RBP20.29■□□□□ 0.84
CCDC9-205ENST00000600117 AARSP49588 968 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC9-205ENST00000600117 RBP5P82980 135 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 ZXDAP98168 799 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 CBWD6Q4V339 395 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 TCP11X2Q5H9J9 407 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 CBWD3Q5JTY5 395 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 CBWD5Q5RIA9 395 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 LUZP1Q86V48 1076 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 RNF168Q8IYW5 571 aaPredicted RBP20.29■□□□□ 0.84
CCDC9-205ENST00000600117 FBXL6Q8N531 539 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 LRRC52Q8N7C0 313 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 TMEM169Q96HH4 297 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 MSLNLQ96KJ4 702 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 IGFLR1Q9H665 355 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 MMRN2Q9H8L6 949 aa20.29■□□□□ 0.84
CCDC9-205ENST00000600117 MAGEC2Q9UBF1 373 aaPredicted RBP20.29■□□□□ 0.84
CCDC9-205ENST00000600117 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC9-205ENST00000600117 LOC730098B7Z3J9 87 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 TADA2AO75478 443 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 BRCC3P46736 316 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 FMO5P49326 533 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 MXI1P50539 228 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 KCNH2Q12809 1159 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 BIRC3Q13489 604 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 KRT39Q6A163 491 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 FUT10Q6P4F1 479 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 SPPL3Q8TCT6 385 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 TAS1R2Q8TE23 839 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 GPR62Q9BZJ7 368 aa20.28■□□□□ 0.84
CCDC9-205ENST00000600117 PMM2O15305 246 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 PHACTR2O75167 634 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 HLA-DRAP01903 254 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 KRT19P08727 400 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 NDUFV1P49821 464 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 TAF6P49848 677 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 LILRA4P59901 499 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 MYL6P60660 151 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 NCOA4Q13772 614 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 MAN2A1Q16706 1144 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 MIIPQ5JXC2 388 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.84
CCDC9-205ENST00000600117 CREBRFQ8IUR6 639 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 PPP2R3CQ969Q6 453 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 TUBGCP2Q9BSJ2 902 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 XYLT2Q9H1B5 865 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 IRF2BPLQ9H1B7 796 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 ALG13Q9NP73 1137 aaKnown RBP20.27■□□□□ 0.84
CCDC9-205ENST00000600117 LZTS1Q9Y250 596 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 COQ4Q9Y3A0 265 aa20.27■□□□□ 0.84
CCDC9-205ENST00000600117 DCHS1Q96JQ0 3298 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 BECN2A8MW95 431 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 I3L4J1 428 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 STAU1O95793 577 aaKnown RBP20.26■□□□□ 0.83
CCDC9-205ENST00000600117 AFPP02771 609 aaKnown RBP20.26■□□□□ 0.83
CCDC9-205ENST00000600117 ATP1A3P13637 1013 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 PAX3P23760 479 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 DNAJB1P25685 340 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 PNPLA4P41247 253 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 CAMK1Q14012 370 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 CBX2Q14781 532 aaPredicted RBP20.26■□□□□ 0.83
CCDC9-205ENST00000600117 KRT31Q15323 416 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 TAS1R1Q7RTX1 841 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 APTXQ7Z2E3 356 aaKnown RBP20.26■□□□□ 0.83
CCDC9-205ENST00000600117 SEMA4DQ92854 862 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 SUSD3Q96L08 255 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 ZNF560Q96MR9 790 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 TAB2Q9NYJ8 693 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 LIMA1Q9UHB6 759 aaKnown RBP20.26■□□□□ 0.83
CCDC9-205ENST00000600117 NUB1Q9Y5A7 615 aa20.26■□□□□ 0.83
CCDC9-205ENST00000600117 SF3B1O75533 1304 aaKnown RBP eCLIP20.26■□□□□ 0.83
CCDC9-205ENST00000600117 VWA8A3KMH1 1905 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 M0QZQ0 153 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 LRRN2O75325 713 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 PIK3CAP42336 1068 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 MYL7Q01449 175 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 KRT17Q04695 432 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 UBE3AQ05086 875 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 TRPC3Q13507 836 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 SV2CQ496J9 727 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 SMRP1Q8NCR6 262 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 POF1BQ8WVV4 589 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 HPDLQ96IR7 371 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 HERC2P3Q9BVR0 1158 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 VRTNQ9H8Y1 702 aa20.25■□□□□ 0.83
CCDC9-205ENST00000600117 KPNA7A9QM74 516 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 P4HA2O15460 535 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 N4BP1O75113 896 aaKnown RBP20.24■□□□□ 0.83
CCDC9-205ENST00000600117 ASS1P00966 412 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms