RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ELMOD1Q8N336 334 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 LEMD2Q8NC56 503 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 SCFD1Q8WVM8 642 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 SPATA32Q96LK8 384 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 ZNF512Q96ME7 567 aaPredicted RBP11.36□□□□□ -0.59
CCDC9-203ENST00000596938 BLZF1Q9H2G9 400 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 SLC2A4RGQ9NR83 387 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 CGNQ9P2M7 1197 aaKnown RBP11.36□□□□□ -0.59
CCDC9-203ENST00000596938 NUMBLQ9Y6R0 609 aa11.36□□□□□ -0.59
CCDC9-203ENST00000596938 UBE4BO95155 1302 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 FAM237AA0A1B0GTK4 181 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 TGFB1I1O43294 461 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 ACTN4O43707 911 aaKnown RBP11.35□□□□□ -0.59
CCDC9-203ENST00000596938 VNN2O95498 520 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 NPR3P17342 541 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 AFMP43652 599 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 EPHA5P54756 1037 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
CCDC9-203ENST00000596938 RBP5P82980 135 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 TWF1Q12792 350 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 DUSP4Q13115 394 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 PSMD2Q13200 908 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 PLD1Q13393 1074 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 CUL4BQ13620 913 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 SLC5A9Q2M3M2 681 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 PRSS36Q5K4E3 855 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 WSCD1Q658N2 575 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
CCDC9-203ENST00000596938 IQCEQ6IPM2 695 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 CSGALNACT2Q8N6G5 542 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 LRRC52Q8N7C0 313 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 C1orf127Q8N9H9 656 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 FGF14Q92915 247 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 PAGE5Q96GU1 130 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 ZNF560Q96MR9 790 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 CORO1BQ9BR76 489 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
CCDC9-203ENST00000596938 SCAND2PQ9GZW5 306 aaPredicted RBP11.35□□□□□ -0.59
CCDC9-203ENST00000596938 ZCWPW1Q9H0M4 648 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 PDE11AQ9HCR9 933 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 AGPAT3Q9NRZ7 376 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 INTS13Q9NVM9 706 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 HSPBP1Q9NZL4 362 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 CEP72Q9P209 647 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 SERTAD1Q9UHV2 236 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 FBXL21Q9UKT6 434 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 ITGA11Q9UKX5 1188 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 AGAP1Q9UPQ3 857 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 HPSEQ9Y251 543 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 ASB3Q9Y575 518 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 PLXNA3P51805 1871 aa11.35□□□□□ -0.59
CCDC9-203ENST00000596938 A0A1B0GVL5 298 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 ITGB3P05106 788 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 MYL1P05976 194 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 OR4Q2P0C623 313 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 PFKFB1P16118 471 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 CASP1P29466 404 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 ALDH1A3P47895 512 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 TUFMP49411 452 aaKnown RBP11.34□□□□□ -0.59
CCDC9-203ENST00000596938 EPHB3P54753 998 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 DUOXA2Q1HG44 320 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 PDZD4Q76G19 769 aaPredicted RBP11.34□□□□□ -0.59
CCDC9-203ENST00000596938 HS2ST1Q7LGA3 356 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 CBWD2Q8IUF1 395 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 C12orf56Q8IXR9 622 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 SIX5Q8N196 739 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 OR10T2Q8NGX3 314 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 SPATA18Q8TC71 538 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 C2orf15Q8WU43 125 aaKnown RBP11.34□□□□□ -0.59
CCDC9-203ENST00000596938 TMEM174Q8WUU8 243 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 MCRS1Q96EZ8 462 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 TMEM209Q96SK2 561 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 RTP3Q9BQQ7 232 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 CRISPLD1Q9H336 500 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 MFSD1Q9H3U5 465 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 SLC39A2Q9NP94 309 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 GDAP2Q9NXN4 497 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 SLC27A5Q9Y2P5 690 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 YIPF1Q9Y548 306 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 VWA8A3KMH1 1905 aa11.34□□□□□ -0.59
CCDC9-203ENST00000596938 A0A1W2PQ27 194 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 A0A1W2PQ64 194 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 A0A1W2PQD8 194 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 MTMR11A4FU01 709 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 KLRC4O43908 158 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 ECI2O75521 394 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 CFHP08603 1231 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 POLR2BP30876 1174 aaKnown RBP11.33□□□□□ -0.6
CCDC9-203ENST00000596938 CCR2P41597 374 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 PTPN5P54829 565 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 GPC5P78333 572 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 NHLH1Q02575 133 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 BECN1Q14457 450 aa11.33□□□□□ -0.6
CCDC9-203ENST00000596938 SNRNP35Q16560 246 aaKnown RBP11.33□□□□□ -0.6
CCDC9-203ENST00000596938 KNOP1Q1ED39 458 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms