RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SV2BQ7L1I2 683 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 DGLUCYQ7Z3D6 616 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 HS6ST3Q8IZP7 471 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 GPR88Q9GZN0 384 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 HAPLN2Q9GZV7 340 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 EPC1Q9H2F5 836 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 ZNF334Q9HCZ1 680 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 ASAH2Q9NR71 780 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 RCOR1Q9UKL0 485 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 UBQLN1Q9UMX0 589 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 PATJQ8NI35 1801 aa19.06■□□□□ 0.64
SHKBP1-203ENST00000594298 ZNF292O60281 2723 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 TRIP11Q15643 1979 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 SCP2P22307 547 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 STAT6P42226 847 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 NCKAP1LP55160 1127 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 MTAPQ13126 283 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 ARSHQ5FYA8 562 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 GPR161Q8N6U8 529 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 TSPAN18Q96SJ8 248 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 CHRDQ9H2X0 955 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 ZDHHC9Q9Y397 364 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 YIPF1Q9Y548 306 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 EP300Q09472 2414 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 CACNA1IQ9P0X4 2223 aa19.05■□□□□ 0.64
SHKBP1-203ENST00000594298 OR6C75A6NL08 312 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 FAM13AO94988 1023 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 MLLT6P55198 1093 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 PLD1Q13393 1074 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 ZSCAN18Q8TBC5 510 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 FAM3CQ92520 227 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 E2F7Q96AV8 911 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 KIF12Q96FN5 646 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 LRRC3Q9BY71 257 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 LRRC27Q9C0I9 530 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 FAM13BQ9NYF5 915 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 NCDNQ9UBB6 729 aa19.04■□□□□ 0.64
SHKBP1-203ENST00000594298 OTOGLQ3ZCN5 2332 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 ARNTLO00327 626 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 XPOTO43592 962 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 FAM189A1O60320 539 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 TBCAO75347 108 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 VNN2O95498 520 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 PIGRP01833 764 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 ADRB2P07550 413 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 MYL4P12829 197 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 TDGF1P13385 188 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 GDI1P31150 447 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 ABCD1P33897 745 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 MATR3P43243 847 aaKnown RBP eCLIP19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 PPP2R3AQ06190 1150 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 SPAG1Q07617 926 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 GPR17Q13304 367 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 TSSK4Q6SA08 328 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 HAUS6Q7Z4H7 955 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 MFSD6LQ8IWD5 586 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 SHKBP1Q8TBC3 707 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 SECISBP2LQ93073 1101 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 BICD1Q96G01 975 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 REEP2Q9BRK0 252 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 PYM1Q9BRP8 204 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 PANK2Q9BZ23 570 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 CUEDC2Q9H467 287 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 PARVGQ9HBI0 331 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 NDRG2Q9UN36 371 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 PCDHA7Q9UN72 937 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 SMG5Q9UPR3 1016 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 PIAS3Q9Y6X2 628 aa19.03■□□□□ 0.64
SHKBP1-203ENST00000594298 CACNA1AO00555 2505 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 NPHP3-ACAD11A0A0J9YXS1 232 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 MED19A0JLT2 244 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 ZNF263O14978 683 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 GJA1P17302 382 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 TYMPP19971 482 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 PAX3P23760 479 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 TNFSF9P41273 254 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 VIPR2P41587 438 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 LIG4P49917 911 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 CACNB1Q02641 598 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 MYBPC2Q14324 1141 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 TEAD2Q15562 447 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 USP37Q86T82 979 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 TMC8Q8IU68 726 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 TMEM130Q8N3G9 435 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 MYCT1Q8N699 235 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 IQUBQ8NA54 791 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 LRRC15Q8TF66 581 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 MSANTD3Q96H12 275 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 SPATA32Q96LK8 384 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 SCAND2PQ9GZW5 306 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 DNAJC25Q9H1X3 360 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 TBX20Q9UMR3 447 aa19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 TIMM13Q9Y5L4 95 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-203ENST00000594298 NCANO14594 1321 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 COL4A2P08572 1712 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 HEPACAM2A8MVW5 462 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 LACTBL1A8MY62 500 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 OGTO15294 1046 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 OR4Q2P0C623 313 aa19.01■□□□□ 0.63
SHKBP1-203ENST00000594298 ZNF131P52739 623 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms