RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 LIMS2Q7Z4I7 341 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 APPL2Q8NEU8 664 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 SPATA18Q8TC71 538 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 VN1R3Q9BXE9 311 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 ALG13Q9NP73 1137 aaKnown RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 RTN4Q9NQC3 1192 aaKnown RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 DSEQ9UL01 958 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 PCDHB8Q9UN66 801 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 SNX9Q9Y5X1 595 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 SZT2Q5T011 3432 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 A0A1B0GTH6 734 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 CYB561D2O14569 222 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 HUS1O60921 280 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 CYP11A1P05108 521 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 TYMPP19971 482 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 NOP14P78316 857 aaKnown RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 ARID5BQ14865 1188 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 PDE12Q6L8Q7 609 aaKnown RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 VPS52Q8N1B4 723 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 TOP6BLQ8N6T0 577 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 POF1BQ8WVV4 589 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 TTPALQ9BTX7 342 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 HERC2P3Q9BVR0 1158 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 FAM124BQ9H5Z6 455 aaPredicted RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 CERS4Q9HA82 394 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 RRAGDQ9NQL2 400 aaPredicted RBP18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 SSX2IPQ9Y2D8 614 aa18.31■□□□□ 0.52
RPRD1A-209ENST00000590898 ODC1P11926 461 aa18.3■□□□□ 0.52
RPRD1A-209ENST00000590898 PDXDC1Q6P996 788 aa18.3■□□□□ 0.52
RPRD1A-209ENST00000590898 TMEM86AQ8N2M4 240 aa18.3■□□□□ 0.52
RPRD1A-209ENST00000590898 PI4K2AQ9BTU6 479 aa18.3■□□□□ 0.52
RPRD1A-209ENST00000590898 GCNT4Q9P109 453 aa18.3■□□□□ 0.52
RPRD1A-209ENST00000590898 IRAK3Q9Y616 596 aa18.3■□□□□ 0.52
RPRD1A-209ENST00000590898 I3L4J1 428 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 GRM6O15303 877 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 LRRN2O75325 713 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 CTSAP10619 480 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 PON1P27169 355 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 TNNC1P63316 161 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 DSG1Q02413 1049 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 UBXN1Q04323 297 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 NR1I3Q14994 352 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 TAS1R1Q7RTX1 841 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 TMC6Q7Z403 805 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 ZSCAN30Q86W11 494 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 LRCH3Q96II8 777 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 ERGIC2Q96RQ1 377 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 TTYH1Q9H313 450 aaPredicted RBP18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 NGRNQ9NPE2 291 aaKnown RBP18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 TLR9Q9NR96 1032 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 ZKSCAN5Q9Y2L8 839 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 TACC1O75410 805 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 OAZ2O95190 189 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 LRMPQ12912 555 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 MRPL58Q14197 206 aaKnown RBP18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 KIAA0319Q5VV43 1072 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 SMYD5Q6GMV2 418 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 KIAA1841Q6NSI8 718 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 FAM81BQ96LP2 452 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 NT5C1BQ96P26 610 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 CRACR2AQ9BSW2 395 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 OXCT2Q9BYC2 517 aaPredicted RBP18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 ZBP1Q9H171 429 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 CYP3A43Q9HB55 503 aa18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 APOBEC3GQ9HC16 384 aaKnown RBP18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
RPRD1A-209ENST00000590898 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 DNAJB1P25685 340 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 TKTP29401 623 aaKnown RBP18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 GLUD2P49448 558 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 KCNMA1Q12791 1236 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 CAMK1Q14012 370 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 SOWAHAQ2M3V2 549 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 SPOPLQ6IQ16 392 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 ANKS3Q6ZW76 656 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 PIK3R5Q8WYR1 880 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 MMS19Q96T76 1030 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 BCO2Q9BYV7 579 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 NIF3L1Q9GZT8 377 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 INTS2Q9H0H0 1204 aaKnown RBP18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 LMCD1Q9NZU5 365 aa18.28■□□□□ 0.52
RPRD1A-209ENST00000590898 EPOPA6NHQ4 379 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 LILRB3O75022 631 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 URODP06132 367 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 SLC9A1P19634 815 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 TBXAS1P24557 533 aaPredicted RBP18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 LHX1P48742 406 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 YWHAHQ04917 246 aaPredicted RBP18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 TMC7Q7Z402 723 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 METTL23Q86XA0 190 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 CEP57Q86XR8 500 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 PDCL2Q8N4E4 241 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 TTC39CQ8N584 583 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 TATDN2Q93075 761 aa18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 MRPL17Q9NRX2 175 aaKnown RBP18.27■□□□□ 0.52
RPRD1A-209ENST00000590898 L1RE1Q9UN81 338 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms