RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 MEI1Q5TIA1 1274 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 ZBTB33Q86T24 672 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 EFCAB13Q8IY85 973 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 TPCN2Q8NHX9 752 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 UBXN4Q92575 508 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 ZNF668Q96K58 619 aaPredicted RBP10.08□□□□□ -0.8
VPS25-205ENST00000590339 RPGRIP1Q96KN7 1286 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 PCDHB18PQ96TA0 734 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 RAD9AQ99638 391 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 PI4K2AQ9BTU6 479 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 ADAMTS10Q9H324 1103 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 TAS2R14Q9NYV8 317 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 AKT3Q9Y243 479 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 GINS2Q9Y248 185 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 CDY2AQ9Y6F7 541 aa10.08□□□□□ -0.8
VPS25-205ENST00000590339 CTAGE15A4D2H0 777 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 PDE2AO00408 941 aaPredicted RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 CYP26A1O43174 497 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 MTA2O94776 668 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 GJB5O95377 273 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 CTAGE8P0CG41 777 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 CYP11B1P15538 503 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 ZSCAN20P17040 1043 aaPredicted RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 ARF4P18085 180 aaPredicted RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 IBSPP21815 317 aaPredicted RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 TBXAS1P24557 533 aaPredicted RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 PDE6CP51160 858 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 ZNF132P52740 706 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 NCOA4Q13772 614 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 SKIV2LQ15477 1246 aaKnown RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 KYAT1Q16773 422 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 WDR44Q5JSH3 913 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 TEX35Q5T0J7 233 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 SPOPLQ6IQ16 392 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 FBXO38Q6PIJ6 1188 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 CTAGE6Q86UF2 777 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 SLC47A2Q86VL8 602 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 ZNF677Q86XU0 584 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 DNAAF5Q86Y56 855 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 CREG2Q8IUH2 290 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 CTAGE4Q8IX94 777 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 CEP120Q8N960 986 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 MSANTD4Q8NCY6 345 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 ARHGEF26Q96DR7 871 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 CALR3Q96L12 384 aaKnown RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 OSBPL9Q96SU4 736 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 ARID3AQ99856 593 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 TCHPQ9BT92 498 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 MTMR12Q9C0I1 747 aa10.07□□□□□ -0.8
VPS25-205ENST00000590339 PUF60Q9UHX1 559 aaKnown RBP10.07□□□□□ -0.8
VPS25-205ENST00000590339 TRIP12Q14669 1992 aaPredicted RBP10.06□□□□□ -0.8
VPS25-205ENST00000590339 SCN5AQ14524 2016 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.06□□□□□ -0.8
VPS25-205ENST00000590339 M0QZ92 97 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 CES2O00748 559 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 NCK2O43639 380 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 SRGAP2O75044 1071 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 RTN2O75298 545 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 GPR32O75388 356 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 FTCDO95954 541 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 MMEP08473 750 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 CXCL8P10145 99 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 MRPS6P82932 125 aaKnown RBP10.06□□□□□ -0.8
VPS25-205ENST00000590339 CDC42EP1Q00587 391 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 MGAT3Q09327 533 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 LPIN1Q14693 890 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 PCBP1Q15365 356 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS25-205ENST00000590339 DCAF4L1Q3SXM0 396 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 MTERF4Q7Z6M4 381 aaKnown RBP10.06□□□□□ -0.8
VPS25-205ENST00000590339 RPAINQ86UA6 219 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 TMEM192Q8IY95 271 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 CXorf38Q8TB03 319 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 COG1Q8WTW3 980 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 CTNNBL1Q8WYA6 563 aaPredicted RBP10.06□□□□□ -0.8
VPS25-205ENST00000590339 ELMO3Q96BJ8 720 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 FAXDC2Q96IV6 333 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 PPP1R16BQ96T49 567 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 MMS19Q96T76 1030 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 YME1L1Q96TA2 773 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 NIF3L1Q9GZT8 377 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 XYLT2Q9H1B5 865 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 ANKZF1Q9H8Y5 726 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 AGO3Q9H9G7 860 aaKnown RBP10.06□□□□□ -0.8
VPS25-205ENST00000590339 ABCB6Q9NP58 842 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS25-205ENST00000590339 INSL6Q9Y581 213 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 NUB1Q9Y5A7 615 aa10.06□□□□□ -0.8
VPS25-205ENST00000590339 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
VPS25-205ENST00000590339 A0A1B0GUA9 196 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 LINC01553A4QN01 128 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 ENPP3O14638 875 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 ZNF185O15231 689 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 KIF4AO95239 1232 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 TMEM191BP0C7N4 346 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 STAG3L1P0CL83 205 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 CD52P31358 61 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 USP8P40818 1118 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 GRM5P41594 1212 aa10.05□□□□□ -0.8
VPS25-205ENST00000590339 BPIFB4P59827 614 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms