RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 SPOUT1Q5T280 376 aaKnown RBP11.17□□□□□ -0.62
CCDC47-203ENST00000580986 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 FUT10Q6P4F1 479 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 PDXDC1Q6P996 788 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 TRIM65Q6PJ69 517 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.17□□□□□ -0.62
CCDC47-203ENST00000580986 ENOSF1Q7L5Y1 443 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 DDX53Q86TM3 631 aaKnown RBP11.17□□□□□ -0.62
CCDC47-203ENST00000580986 CREBRFQ8IUR6 639 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 TMEM86AQ8N2M4 240 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 TOP6BLQ8N6T0 577 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 TIFAQ96CG3 184 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 IQCDQ96DY2 449 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 BCO2Q9BYV7 579 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 NIF3L1Q9GZT8 377 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 LMAN2LQ9H0V9 348 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 VPS16Q9H269 839 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 CYP3A43Q9HB55 503 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 CHST7Q9NS84 486 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 NUB1Q9Y5A7 615 aa11.17□□□□□ -0.62
CCDC47-203ENST00000580986 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 FSD2A1L4K1 749 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 H3BNC9 293 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 PPEF2O14830 753 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 SPTLC1O15269 473 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 TADA2AO75478 443 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 FGF18O76093 207 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 SOD2P04179 222 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 ITGB1P05556 798 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 ODC1P11926 461 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 MYOGP15173 224 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 FGFR3P22607 806 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 PON1P27169 355 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 CTNNB1P35222 781 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 PBX1P40424 430 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 TIGD5Q53EQ6 642 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 FIGNQ5HY92 759 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 ZNF667Q5HYK9 610 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
CCDC47-203ENST00000580986 TMEM173Q86WV6 379 aaPredicted RBP11.16□□□□□ -0.62
CCDC47-203ENST00000580986 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 SENP8Q96LD8 212 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 NT5C1BQ96P26 610 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 MMRN2Q9H8L6 949 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 APEX2Q9UBZ4 518 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 PUF60Q9UHX1 559 aaKnown RBP11.16□□□□□ -0.62
CCDC47-203ENST00000580986 SSX2IPQ9Y2D8 614 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 SIK3Q9Y2K2 1263 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 PRG3Q9Y2Y8 225 aaPredicted RBP11.16□□□□□ -0.62
CCDC47-203ENST00000580986 IRAK3Q9Y616 596 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 PLXNA4Q9HCM2 1894 aa11.16□□□□□ -0.62
CCDC47-203ENST00000580986 ITIH6Q6UXX5 1313 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 GABRDO14764 452 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 HUS1O60921 280 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 ARHGEF15O94989 841 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 OAZ2O95190 189 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 C1RP00736 705 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 ASPAP45381 313 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 TNNC1P63316 161 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 CREMQ03060 361 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 UBXN1Q04323 297 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 INCA1Q0VD86 236 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 KCNMA1Q12791 1236 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 USP41Q3LFD5 358 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 WDR72Q3MJ13 1102 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 DPY19L2P1Q6NXN4 242 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 KLHL23Q8NBE8 558 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 BCL7CQ8WUZ0 217 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-203ENST00000580986 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 FAM84AQ96KN4 292 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 NAP1L5Q96NT1 182 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-203ENST00000580986 C17orf80Q9BSJ5 609 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 GPR62Q9BZJ7 368 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 INTS2Q9H0H0 1204 aaKnown RBP11.15□□□□□ -0.62
CCDC47-203ENST00000580986 NKX2-4Q9H2Z4 354 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 APOBEC3GQ9HC16 384 aaKnown RBP11.15□□□□□ -0.62
CCDC47-203ENST00000580986 CACNG4Q9UBN1 327 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
CCDC47-203ENST00000580986 COL4A4P53420 1690 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-203ENST00000580986 TRANK1O15050 2925 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 PES1O00541 588 aaKnown RBP11.14□□□□□ -0.63
CCDC47-203ENST00000580986 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 CYB561D2O14569 222 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 CTSAP10619 480 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 PBX3P40426 434 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 LHX1P48742 406 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 YWHAEP62258 255 aaKnown RBP11.14□□□□□ -0.63
CCDC47-203ENST00000580986 DSG1Q02413 1049 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 CUL2Q13617 745 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 MRPL58Q14197 206 aaKnown RBP11.14□□□□□ -0.63
CCDC47-203ENST00000580986 BMS1Q14692 1282 aaKnown RBP11.14□□□□□ -0.63
CCDC47-203ENST00000580986 SOWAHAQ2M3V2 549 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 ANKS3Q6ZW76 656 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 FMNL3Q8IVF7 1028 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 SPPL3Q8TCT6 385 aa11.14□□□□□ -0.63
CCDC47-203ENST00000580986 MRFAP1L1Q96HT8 127 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms