RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 BCO2Q9BYV7 579 aa17.05■□□□□ 0.32
CSNK1D-212ENST00000580061 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 HUS1O60921 280 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 CYP11A1P05108 521 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 ODC1P11926 461 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 TBXAS1P24557 533 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 MRE11P49959 708 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 GCNT1Q02742 428 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 CUL2Q13617 745 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 SOWAHAQ2M3V2 549 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 SCARA5Q6ZMJ2 495 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 RRAGAQ7L523 313 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 VSTM4Q8IW00 320 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 NEK11Q8NG66 645 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 TIFAQ96CG3 184 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 FAM81BQ96LP2 452 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 SDCBP2Q9H190 292 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 GANQ9H2C0 597 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 SMYD3Q9H7B4 428 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 SLC28A3Q9HAS3 691 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 UBE2TQ9NPD8 197 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 FAM207AQ9NSI2 230 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 PCDHB8Q9UN66 801 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 L1RE1Q9UN81 338 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 CHD7Q9P2D1 2997 aa17.04■□□□□ 0.32
CSNK1D-212ENST00000580061 ARHGEF37A1IGU5 675 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 SYN3O14994 580 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 EPHB6O15197 1021 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 TACC1O75410 805 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 ADCY5O95622 1261 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 UCHL3P15374 230 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 FGFR3P22607 806 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 RFX1P22670 979 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 RAP1GAPP47736 663 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 CDH8P55286 799 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 KRT17Q04695 432 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 IQCEQ6IPM2 695 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 TAS1R1Q7RTX1 841 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 DDX53Q86TM3 631 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 PDCL2Q8N4E4 241 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 APPL2Q8NEU8 664 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 KAT5Q92993 513 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 KREMEN1Q96MU8 473 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 ARID3AQ99856 593 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 NAA15Q9BXJ9 866 aaKnown RBP17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 CYP3A43Q9HB55 503 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 STK39Q9UEW8 545 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 FBXL5Q9UKA1 691 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 DNAJC12Q9UKB3 198 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 AJAP1Q9UKB5 411 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 MTUS1Q9ULD2 1270 aa17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 TIMM13Q9Y5L4 95 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-212ENST00000580061 COL4A4P53420 1690 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 SOD2P04179 222 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 FAM163BP0C2L3 166 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 TYMPP19971 482 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 TKTP29401 623 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 USP41Q3LFD5 358 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 FIGNQ5HY92 759 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 WSCD1Q658N2 575 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 SPECC1LQ69YQ0 1117 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 ENOSF1Q7L5Y1 443 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 TMEM86AQ8N2M4 240 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 KBTBD7Q8WVZ9 684 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 JAKMIP2Q96AA8 810 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 MRPL45Q9BRJ2 306 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 C11orf84Q9BUA3 381 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 HERC2P3Q9BVR0 1158 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 TTYH3Q9C0H2 523 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 CHST7Q9NS84 486 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 DSEQ9UL01 958 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 LZTS1Q9Y250 596 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 DAAM1Q9Y4D1 1078 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 FHOD1Q9Y613 1164 aa17.02■□□□□ 0.32
CSNK1D-212ENST00000580061 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 WARSP23381 471 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 MFAP3P55082 362 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 POLR2FP61218 127 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 UBE3AQ05086 875 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 RTP2Q5QGT7 225 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 OSTM1Q86WC4 334 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 ADGRF2Q8IZF7 708 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 UBR7Q8N806 425 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 FBXO22Q8NEZ5 403 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 SPATA18Q8TC71 538 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 SPPL3Q8TCT6 385 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 B3GALT6Q96L58 329 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 TTPALQ9BTX7 342 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 NUP58Q9BVL2 599 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 FAM124BQ9H5Z6 455 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 CERS4Q9HA82 394 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 ALG13Q9NP73 1137 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 CISHQ9NSE2 258 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 CEP72Q9P209 647 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 ATG2AQ2TAZ0 1938 aa17.01■□□□□ 0.31
CSNK1D-212ENST00000580061 H3BNC9 293 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms