RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 MEFVO15553 781 aaPredicted RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 ALDH1A2O94788 518 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 LYPLA2O95372 231 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 BAG4O95429 457 aaKnown RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 IGHDP01880 384 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 CAPNS1P04632 268 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 CFIP05156 583 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 LIG1P18858 919 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 GABRR2P28476 465 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 WEE1P30291 646 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 HOXD12P35452 270 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 AVPR1AP37288 418 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 RARRES1P49788 294 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 EXOSC10Q01780 885 aaKnown RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 CACNB1Q02641 598 aaPredicted RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 YWHAHQ04917 246 aaPredicted RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 BFSP1Q12934 665 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 MRPL58Q14197 206 aaKnown RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 VEPH1Q14D04 833 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 INF2Q27J81 1249 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 LYSMD4Q5XG99 296 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 GALNT17Q6IS24 598 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 ANO7Q6IWH7 933 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 CC2D1AQ6P1N0 951 aaPredicted RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 SLC23A3Q6PIS1 610 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 RNF19BQ6ZMZ0 732 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 RABEPKQ7Z6M1 372 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 NEK8Q86SG6 692 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 SYT12Q8IV01 421 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 BLIDQ8IZY5 108 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 CPA6Q8N4T0 437 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 DAGLBQ8NCG7 672 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 DEPTORQ8TB45 409 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 DDX12PQ92771 950 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 PSMG2Q969U7 264 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 SUSD3Q96L08 255 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 CNOT6LQ96LI5 555 aaKnown RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 CCDC94Q9BW85 323 aaPredicted RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 GTPBP2Q9BX10 602 aaKnown RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 FZD8Q9H461 694 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 TASP1Q9H6P5 420 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 KIF9Q9HAQ2 790 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 CIZ1Q9ULV3 898 aaPredicted RBP6.45□□□□□ -1.38
SMG6-219ENST00000575663 RAXQ9Y2V3 346 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 PCDHB9Q9Y5E1 797 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 DMXL2Q8TDJ6 3036 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 RALGAPA1Q6GYQ0 2036 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 NOTCH4Q99466 2003 aa6.45□□□□□ -1.38
SMG6-219ENST00000575663 LAMA1P25391 3075 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 SMIM28A0A1B0GU29 152 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 TK2O00142 265 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 TNFRSF10BO14763 440 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 MAP3K13O43283 966 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 CCNT1O60563 726 aaKnown RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 IFNAR1P17181 557 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 BCKDHBP21953 392 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 IGFBP6P24592 240 aaPredicted RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 MARCKSP29966 332 aaPredicted RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 RPL9P32969 192 aaKnown RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 NAMPTP43490 491 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 CYP4F8P98187 520 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 GFPT1Q06210 699 aaPredicted RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 PPP2R5AQ15172 486 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 PDGFRLQ15198 375 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 TAF12Q16514 161 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 SPDYCQ5MJ68 293 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 ATF7IP2Q5U623 682 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 CD300LGQ6UXG3 332 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 GAREM2Q75VX8 874 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 ARMCX6Q7L4S7 300 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 MAEAQ7L5Y9 396 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 USP37Q86T82 979 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 RASSF3Q86WH2 238 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 GPIHBP1Q8IV16 184 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 FAM177A1Q8N128 213 aaPredicted RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 BEST2Q8NFU1 509 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 CEP76Q8TAP6 659 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 ADAMTS14Q8WXS8 1223 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 CD101Q93033 1021 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 TBC1D32Q96NH3 1257 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 LRRC3BQ96PB8 259 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 PGLYRP2Q96PD5 576 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 EIF2AK1Q9BQI3 630 aaKnown RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 LRRC3Q9BY71 257 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 DNAJC25Q9H1X3 360 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 CXCL16Q9H2A7 254 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 EBF3Q9H4W6 596 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 GPRC5CQ9NQ84 441 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 HPS4Q9NQG7 708 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 GKN1Q9NS71 199 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 POLR3BQ9NW08 1133 aaPredicted RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 PCDHB8Q9UN66 801 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 APOBEC2Q9Y235 224 aaKnown RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 INVSQ9Y283 1065 aa6.44□□□□□ -1.38
SMG6-219ENST00000575663 SETXQ7Z333 2677 aaKnown RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 ATXN2Q99700 1313 aaKnown RBP6.44□□□□□ -1.38
SMG6-219ENST00000575663 VWA8A3KMH1 1905 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 OR6C75A6NL08 312 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 M0R2N6 131 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 ZBTB39O15060 712 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms