RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TRPC3Q13507 836 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 NCOA4Q13772 614 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 RAB33AQ14088 237 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 EP400NLQ6ZTU2 488 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 LIMS2Q7Z4I7 341 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 IRF2BP1Q8IU81 584 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 XYLT2Q9H1B5 865 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 METTL14Q9HCE5 456 aaKnown RBP12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 DACH1Q9UI36 760 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 FBXL5Q9UKA1 691 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 COG5Q9UP83 839 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 SNX9Q9Y5X1 595 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 CDY1Q9Y6F8 540 aa12.85□□□□□ -0.35
RABGGTA-218ENST00000560777 BRWD1Q9NSI6 2320 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 TGM5O43548 720 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 TBX10O75333 385 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 FGFR1OPO95684 399 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 STAU1O95793 577 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 GNA14O95837 355 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 C1RP00736 705 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 SPATA31D3P0C874 917 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 KCNA5P22460 613 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 ATICP31939 592 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 TFF2Q03403 129 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 SOWAHAQ2M3V2 549 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 CCDC40Q4G0X9 1142 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 KRT39Q6A163 491 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 OVOS1Q6IE37 1185 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 SLC8B1Q6J4K2 584 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 SPATA31D4Q6ZUB0 917 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 PDCL2Q8N4E4 241 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 SLC35C1Q96A29 364 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 ELMO3Q96BJ8 720 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 RTP3Q9BQQ7 232 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 MMRN2Q9H8L6 949 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 TMEM8AQ9HCN3 771 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 DSEQ9UL01 958 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 BARX2Q9UMQ3 279 aaPredicted RBP12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
RABGGTA-218ENST00000560777 ARHGEF37A1IGU5 675 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 STX10O60499 249 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 HUS1O60921 280 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 LRRN2O75325 713 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 GLUD1P00367 558 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 HLA-DRAP01903 254 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 STX1AQ16623 288 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 SGSM1Q2NKQ1 1148 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 SKOR2Q2VWA4 1001 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 WDR72Q3MJ13 1102 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 DCAF17Q5H9S7 520 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 ZNF280DQ6N043 979 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 SYCE2Q6PIF2 218 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 C11orf57Q6ZUT1 292 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 DPH6Q7L8W6 267 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 TRIM59Q8IWR1 403 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 TOP6BLQ8N6T0 577 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 ZNF461Q8TAF7 563 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 CASP10Q92851 521 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 ANO10Q9NW15 660 aa12.83□□□□□ -0.36
RABGGTA-218ENST00000560777 WDR27A2RRH5 827 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 OR6C75A6NL08 312 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 GABRDO14764 452 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 ABLIM3O94929 683 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 ASS1P00966 412 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 ARPP19P56211 112 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 ROR1Q01973 937 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 TYRO3Q06418 890 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 NFKBIBQ15653 356 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 LEXMQ3ZCV2 418 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 THEM5Q8N1Q8 247 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 TMEM86AQ8N2M4 240 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 KREMEN2Q8NCW0 462 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 OR10T2Q8NGX3 314 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 ENOX1Q8TC92 643 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 HDAC7Q8WUI4 952 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 KBTBD7Q8WVZ9 684 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 TAF4BQ92750 862 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 SEMA4DQ92854 862 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 MMS19Q96T76 1030 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 PI4K2AQ9BTU6 479 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 S1PR5Q9H228 398 aa12.82□□□□□ -0.36
RABGGTA-218ENST00000560777 THEGQ9P2T0 379 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms