RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CXCL14O95715 111 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 CREMQ03060 361 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 PSMD5Q16401 504 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 ANKS3Q6ZW76 656 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 CREBRFQ8IUR6 639 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 LNX1Q8TBB1 728 aaPredicted RBP23.29■■□□□ 1.32
SNX1-206ENST00000559389 SEMA4DQ92854 862 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 RXFP1Q9HBX9 757 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 CBX8Q9HC52 389 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.29■■□□□ 1.32
SNX1-206ENST00000559389 MTRRQ9UBK8 725 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 DSEQ9UL01 958 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 L1RE1Q9UN81 338 aa23.29■■□□□ 1.32
SNX1-206ENST00000559389 CA8P35219 290 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 NOP14P78316 857 aaKnown RBP23.28■■□□□ 1.32
SNX1-206ENST00000559389 YWHAHQ04917 246 aaPredicted RBP23.28■■□□□ 1.32
SNX1-206ENST00000559389 MRPL58Q14197 206 aaKnown RBP23.28■■□□□ 1.32
SNX1-206ENST00000559389 SGSM1Q2NKQ1 1148 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 LIMS2Q7Z4I7 341 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 TOP6BLQ8N6T0 577 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 TUBGCP2Q9BSJ2 902 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 PI4K2AQ9BTU6 479 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 IMPG2Q9BZV3 1241 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 TSPY26PQ9H489 355 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 RAB20Q9NX57 234 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 TIMM13Q9Y5L4 95 aaPredicted RBP23.28■■□□□ 1.32
SNX1-206ENST00000559389 BACE2Q9Y5Z0 518 aa23.28■■□□□ 1.32
SNX1-206ENST00000559389 LRRN2O75325 713 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 TNNC1P63316 161 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 WDR72Q3MJ13 1102 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 TCEAL5Q5H9L2 206 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 ZNF667Q5HYK9 610 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 MIIPQ5JXC2 388 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 WSCD1Q658N2 575 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 ZNF280DQ6N043 979 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 PDCL2Q8N4E4 241 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 FAM200AQ8TCP9 573 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 PPP2R3CQ969Q6 453 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 FNIP2Q9P278 1114 aa23.27■■□□□ 1.32
SNX1-206ENST00000559389 H7C4K7 107 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 HUS1O60921 280 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 OAZ2O95190 189 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 CNPP09543 421 aaKnown RBP23.26■■□□□ 1.31
SNX1-206ENST00000559389 PRKCSHP14314 528 aaPredicted RBP23.26■■□□□ 1.31
SNX1-206ENST00000559389 KRT31Q15323 416 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 DUSP6Q16828 381 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 SOWAHAQ2M3V2 549 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 OVOS1Q6IE37 1185 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 SPOPLQ6IQ16 392 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 ADGRF2Q8IZF7 708 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 SPATA18Q8TC71 538 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 ELMO3Q96BJ8 720 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 KLHL5Q96PQ7 755 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 EMILIN2Q9BXX0 1053 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 APOBEC3GQ9HC16 384 aaKnown RBP23.26■■□□□ 1.31
SNX1-206ENST00000559389 TAB2Q9NYJ8 693 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 POLIQ9UNA4 740 aa23.26■■□□□ 1.31
SNX1-206ENST00000559389 BECN2A8MW95 431 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 TEX28O15482 410 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 TBC1D4O60343 1298 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 CLSTN1O94985 981 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 RPL17P18621 184 aaKnown RBP23.25■■□□□ 1.31
SNX1-206ENST00000559389 NDUFV1P49821 464 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 VWA3BQ502W6 1294 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 DPH6Q7L8W6 267 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 LUZP1Q86V48 1076 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 METTL23Q86XA0 190 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 TMEM86AQ8N2M4 240 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 CCDC150Q8NCX0 1101 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 KBTBD7Q8WVZ9 684 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 CDCA3Q99618 268 aaPredicted RBP23.25■■□□□ 1.31
SNX1-206ENST00000559389 NIF3L1Q9GZT8 377 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 NDST4Q9H3R1 872 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 NXF1Q9UBU9 619 aaKnown RBP23.25■■□□□ 1.31
SNX1-206ENST00000559389 LIMA1Q9UHB6 759 aaKnown RBP23.25■■□□□ 1.31
SNX1-206ENST00000559389 FBXL5Q9UKA1 691 aa23.25■■□□□ 1.31
SNX1-206ENST00000559389 MYO9BQ13459 2157 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 ADH1AP07327 375 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 ASPAP45381 313 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 HYAL1Q12794 435 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 CETN1Q12798 172 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 CTXN3Q4LDR2 81 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 SLC8B1Q6J4K2 584 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 RSPO2Q6UXX9 243 aaPredicted RBP23.24■■□□□ 1.31
SNX1-206ENST00000559389 MICALL1Q8N3F8 863 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 LMO3Q8TAP4 145 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 MMS19Q96T76 1030 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 RTP3Q9BQQ7 232 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 CLSTN3Q9BQT9 956 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 SMYD3Q9H7B4 428 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 TLE6Q9H808 572 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.24■■□□□ 1.31
SNX1-206ENST00000559389 PLXNA3P51805 1871 aa23.24■■□□□ 1.31
SNX1-206ENST00000559389 PRRC2BQ5JSZ5 2229 aaKnown RBP23.23■■□□□ 1.31
SNX1-206ENST00000559389 GTPBP10A4D1E9 387 aaKnown RBP23.23■■□□□ 1.31
SNX1-206ENST00000559389 GABRDO14764 452 aa23.23■■□□□ 1.31
SNX1-206ENST00000559389 PER2O15055 1255 aa23.23■■□□□ 1.31
SNX1-206ENST00000559389 ADAM12O43184 909 aa23.23■■□□□ 1.31
SNX1-206ENST00000559389 CLASP2O75122 1294 aaKnown RBP23.23■■□□□ 1.31
SNX1-206ENST00000559389 TACC1O75410 805 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms