RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MOSPD3O75425 235 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 IL18RAPO95256 599 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 VNN2O95498 520 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 FGF19O95750 216 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 DCNP07585 359 aaKnown RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 NFICP08651 508 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 GLULP15104 373 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 CCR2P41597 374 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 RPS9P46781 194 aaKnown RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 EPHB3P54753 998 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 MLLT6P55198 1093 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 SPAG1Q07617 926 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 TWF1Q12792 350 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 SMARCB1Q12824 385 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 RESTQ13127 1097 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 SNW1Q13573 536 aaKnown RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 ALCAMQ13740 583 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 TMEM132DQ14C87 1099 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 FAM78AQ5JUQ0 283 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 RRAGBQ5VZM2 374 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 C9orf57Q5W0N0 161 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 ADALQ6DHV7 355 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 TANGO2Q6ICL3 276 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 OVOS1Q6IE37 1185 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 JADE1Q6IE81 842 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 CENPPQ6IPU0 288 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 DSTYKQ6XUX3 929 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 CCDC73Q6ZRK6 1079 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 USP49Q70CQ1 688 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 SV2BQ7L1I2 683 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 SFR1Q86XK3 245 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 HSCBQ8IWL3 235 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 C2orf15Q8WU43 125 aaKnown RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 SMARCD2Q92925 531 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 IRF7Q92985 503 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 CLDN23Q96B33 292 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 DNAJC19Q96DA6 116 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 TCEAL4Q96EI5 215 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 SENP8Q96LD8 212 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 IER2Q9BTL4 223 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 LRRC3Q9BY71 257 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 BCO2Q9BYV7 579 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 FOXQ1Q9C009 403 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 ZHX3Q9H4I2 956 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 ZSCAN16Q9H4T2 348 aaPredicted RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 LTB4R2Q9NPC1 389 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 FBXO4Q9UKT5 387 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 AGO2Q9UKV8 859 aaKnown RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 EXOC7Q9UPT5 735 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 MRPS17Q9Y2R5 130 aaKnown RBP7.16□□□□□ -1.26
SLIRP-203ENST00000554074 YIPF1Q9Y548 306 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 ATG2BQ96BY7 2078 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 DMXL1Q9Y485 3027 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 CEP250Q9BV73 2442 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 MTMR11A4FU01 709 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 MYMKA6NI61 221 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ANKRD63C9JTQ0 380 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 K7ELQ4 463 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 MAN2B1O00754 1011 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 PPEF2O14830 753 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 KIAA0391O15091 583 aaKnown RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 LMNAP02545 664 aaKnown RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 SP9P0CG40 484 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 PSMC3P17980 439 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 GARTP22102 1010 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 WEE1P30291 646 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ADSSP30520 456 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 PNPLA4P41247 253 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ALDH1A3P47895 512 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 NASPP49321 788 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ACOT2P49753 483 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 GUCY2FP51841 1108 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 BECN1Q14457 450 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 SLC39A14Q15043 492 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ZC2HC1CQ53FD0 456 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 SPECC1Q5M775 1068 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 L1TD1Q5T7N2 865 aaKnown RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ARMCX5Q6P1M9 558 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 C1orf228Q6PIY5 440 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 CRELD2Q6UXH1 353 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ZNF852Q6ZMS4 543 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 MAMSTRQ6ZN01 415 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 TPRG1Q6ZUI0 275 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ITIH5Q86UX2 942 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 TMC8Q8IU68 726 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 BRSK2Q8IWQ3 736 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 MAML2Q8IZL2 1156 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 HS6ST3Q8IZP7 471 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 ST13P5Q8NFI4 369 aaPredicted RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 SHKBP1Q8TBC3 707 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 POMGNT1Q8WZA1 660 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 NELL1Q92832 810 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 PSMG2Q969U7 264 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 FAM212AQ96EL1 285 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 MSANTD3Q96H12 275 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 TRMT61BQ9BVS5 477 aaKnown RBP7.15□□□□□ -1.26
SLIRP-203ENST00000554074 PLA2G2FQ9BZM2 168 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 DNAJC25Q9H1X3 360 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 CRISPLD1Q9H336 500 aa7.15□□□□□ -1.26
SLIRP-203ENST00000554074 BRD9Q9H8M2 597 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms