RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 DPH6Q7L8W6 267 aa20.9■□□□□ 0.94
DDX55-207ENST00000540763 TAF4BQ92750 862 aa20.9■□□□□ 0.94
DDX55-207ENST00000540763 SLC35C1Q96A29 364 aa20.9■□□□□ 0.94
DDX55-207ENST00000540763 HPDLQ96IR7 371 aa20.9■□□□□ 0.94
DDX55-207ENST00000540763 THAP9Q9H5L6 903 aa20.9■□□□□ 0.94
DDX55-207ENST00000540763 MUC3AQ02505 3323 aa20.89■□□□□ 0.94
DDX55-207ENST00000540763 PMM2O15305 246 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 TEX28O15482 410 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 TBC1D4O60343 1298 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 CST3P01034 146 aaPredicted RBP20.89■□□□□ 0.93
DDX55-207ENST00000540763 TYRO3Q06418 890 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 NCOA4Q13772 614 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 KRT39Q6A163 491 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 SLC8B1Q6J4K2 584 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 PRSS55Q6UWB4 352 aaPredicted RBP20.89■□□□□ 0.93
DDX55-207ENST00000540763 TMEM86AQ8N2M4 240 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 TOP6BLQ8N6T0 577 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 ENOX1Q8TC92 643 aaKnown RBP20.89■□□□□ 0.93
DDX55-207ENST00000540763 ADAMTS19Q8TE59 1207 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 XYLT2Q9H1B5 865 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 COG5Q9UP83 839 aa20.89■□□□□ 0.93
DDX55-207ENST00000540763 CYB561D2O14569 222 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 N4BP1O75113 896 aaKnown RBP20.88■□□□□ 0.93
DDX55-207ENST00000540763 VNN1O95497 513 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 FAM163BP0C2L3 166 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 GCLMP48507 274 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 MXI1P50539 228 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 CLCN4P51793 760 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 ADAM15Q13444 863 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 NFKBIBQ15653 356 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 TPD52L1Q16890 204 aaPredicted RBP20.88■□□□□ 0.93
DDX55-207ENST00000540763 DCAF17Q5H9S7 520 aaPredicted RBP20.88■□□□□ 0.93
DDX55-207ENST00000540763 TCERG1LQ5VWI1 586 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 LIMS2Q7Z4I7 341 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 RBM23Q86U06 439 aaKnown RBP20.88■□□□□ 0.93
DDX55-207ENST00000540763 FAM114A1Q8IWE2 563 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 TRIM59Q8IWR1 403 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 CLSTN3Q9BQT9 956 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 DPP7Q9UHL4 492 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 HCFC2Q9Y5Z7 792 aa20.88■□□□□ 0.93
DDX55-207ENST00000540763 OR6C75A6NL08 312 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 PER2O15055 1255 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 HUS1O60921 280 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 KLRC2P26717 231 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 PIK3CAP42336 1068 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 MYL6P60660 151 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 RAB33AQ14088 237 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 SGSM1Q2NKQ1 1148 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 ZNF699Q32M78 642 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 OVOS1Q6IE37 1185 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 METTL23Q86XA0 190 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 SLC22A17Q8WUG5 538 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 HDAC7Q8WUI4 952 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 CASP10Q92851 521 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 FAXDC2Q96IV6 333 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 COQ4Q9Y3A0 265 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 SNX9Q9Y5X1 595 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 REV3LO60673 3130 aa20.87■□□□□ 0.93
DDX55-207ENST00000540763 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.86■□□□□ 0.93
DDX55-207ENST00000540763 P4HA2O15460 535 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 GLP2RO95838 553 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 GLUD1P00367 558 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 ASS1P00966 412 aaKnown RBP20.86■□□□□ 0.93
DDX55-207ENST00000540763 HLA-DRAP01903 254 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 GTF2F1P35269 517 aaKnown RBP eCLIP20.86■□□□□ 0.93
DDX55-207ENST00000540763 CTXN3Q4LDR2 81 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 SCARA3Q6AZY7 606 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 ELMSAN1Q6PJG2 1045 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 C11orf57Q6ZUT1 292 aaPredicted RBP20.86■□□□□ 0.93
DDX55-207ENST00000540763 CNOT6LQ96LI5 555 aaKnown RBP20.86■□□□□ 0.93
DDX55-207ENST00000540763 UHRF1Q96T88 793 aaPredicted RBP20.86■□□□□ 0.93
DDX55-207ENST00000540763 FUCA2Q9BTY2 467 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 IMPG2Q9BZV3 1241 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 NAT10Q9H0A0 1025 aaKnown RBP20.86■□□□□ 0.93
DDX55-207ENST00000540763 DZANK1Q9NVP4 752 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 FBXL5Q9UKA1 691 aa20.86■□□□□ 0.93
DDX55-207ENST00000540763 P4HA1P13674 534 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 PRKCSHP14314 528 aaPredicted RBP20.85■□□□□ 0.93
DDX55-207ENST00000540763 TNNC1P63316 161 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 SKIV2LQ15477 1246 aaKnown RBP20.85■□□□□ 0.93
DDX55-207ENST00000540763 WDR72Q3MJ13 1102 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 ZNF667Q5HYK9 610 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 IRF2BP1Q8IU81 584 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 PDCL2Q8N4E4 241 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 CCDC150Q8NCX0 1101 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 FBXL13Q8NEE6 735 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 HLA-CQ95604 372 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 BPIFA3Q9BQP9 254 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 IGFLR1Q9H665 355 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 UBE2ZQ9H832 354 aaPredicted RBP20.85■□□□□ 0.93
DDX55-207ENST00000540763 CLDND1Q9NY35 253 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 MAFFQ9ULX9 164 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 L1RE1Q9UN81 338 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.85■□□□□ 0.93
DDX55-207ENST00000540763 TIMM13Q9Y5L4 95 aaPredicted RBP20.85■□□□□ 0.93
DDX55-207ENST00000540763 CDY1Q9Y6F8 540 aa20.85■□□□□ 0.93
DDX55-207ENST00000540763 TCF20Q9UGU0 1960 aaKnown RBP20.85■□□□□ 0.93
DDX55-207ENST00000540763 BRWD1Q9NSI6 2320 aa20.84■□□□□ 0.93
DDX55-207ENST00000540763 GABRDO14764 452 aa20.84■□□□□ 0.93
DDX55-207ENST00000540763 TACC1O75410 805 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms