RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 CDC42EP1Q00587 391 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 CREMQ03060 361 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 SCAPQ12770 1279 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 SP140Q13342 867 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 MPP3Q13368 585 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 NFE2Q16621 373 aaPredicted RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 MINDY4Q4G0A6 757 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 CCDC157Q569K6 752 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 HSP90AB3PQ58FF7 597 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 IFIT1BQ5T764 474 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 NXNQ6DKJ4 435 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 PPP4R4Q6NUP7 873 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 GADL1Q6ZQY3 521 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 C1QL2Q7Z5L3 287 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 TTC7BQ86TV6 843 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 RHOT1Q8IXI2 618 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 DRC7Q8IY82 874 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 CCDC146Q8IYE0 955 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 PQLC1Q8N2U9 271 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 PDILTQ8N807 584 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 SNRNP27Q8WVK2 155 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 CASKIN2Q8WXE0 1202 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 PRDM12Q9H4Q4 367 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 GNL3LQ9NVN8 582 aaKnown RBP3.78□□□□□ -1.8
COPB1-205ENST00000526527 SLC52A1Q9NWF4 448 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 SCOCQ9UIL1 159 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 TLK1Q9UKI8 766 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 POLHQ9Y253 713 aa3.78□□□□□ -1.8
COPB1-205ENST00000526527 LAMC3Q9Y6N6 1575 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 MAST3O60307 1309 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 EPB41L2O43491 1005 aaKnown RBP3.77□□□□□ -1.81
COPB1-205ENST00000526527 TSPAN6O43657 245 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 CFIP05156 583 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 ALAS1P13196 640 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 ATF3P18847 181 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 ABCG1P45844 678 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 CHN2P52757 468 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 POU5F1Q01860 360 aaKnown RBP3.77□□□□□ -1.81
COPB1-205ENST00000526527 NHLH1Q02575 133 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 LMOD3Q0VAK6 560 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 BIRC2Q13490 618 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 GFOD2Q3B7J2 385 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 MFSD14BQ5SR56 506 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 FAM102BQ5T8I3 360 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 WDR75Q8IWA0 830 aaKnown RBP3.77□□□□□ -1.81
COPB1-205ENST00000526527 TCEAL8Q8IYN2 117 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 MYO1HQ8N1T3 1032 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 CAMKK1Q8N5S9 505 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 OTUD6BQ8N6M0 293 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 AOPEPQ8N6M6 819 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 PAF1Q8N7H5 531 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.77□□□□□ -1.81
COPB1-205ENST00000526527 CAGE1Q8TC20 777 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 NRG4Q8WWG1 115 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 COA7Q96BR5 231 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 FAM167AQ96KS9 214 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 SLC2A13Q96QE2 648 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 SENP7Q9BQF6 1050 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 C1QTNF7Q9BXJ2 289 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 RHOBTB2Q9BYZ6 727 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 REXO4Q9GZR2 422 aaKnown RBP3.77□□□□□ -1.81
COPB1-205ENST00000526527 DMRT3Q9NQL9 472 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.77□□□□□ -1.81
COPB1-205ENST00000526527 CFTRP13569 1480 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 FANCD2Q9BXW9 1451 aa3.77□□□□□ -1.81
COPB1-205ENST00000526527 CEP164Q9UPV0 1460 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 CCDC154A6NI56 674 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 DRGXA6NNA5 263 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 PJA2O43164 708 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 DHX16O60231 1041 aaKnown RBP3.76□□□□□ -1.81
COPB1-205ENST00000526527 PCDHGA12O60330 932 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 RBMXL2O75526 392 aaKnown RBP3.76□□□□□ -1.81
COPB1-205ENST00000526527 CDKL5O76039 1030 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 ZFPL1O95159 310 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 MATN4O95460 622 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 FOSP01100 380 aaPredicted RBP3.76□□□□□ -1.81
COPB1-205ENST00000526527 IGLV2-14P01704 120 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 ELANEP08246 267 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 MXRA7P84157 204 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 HLTFQ14527 1009 aaKnown RBP eCLIP3.76□□□□□ -1.81
COPB1-205ENST00000526527 ZRSR2Q15696 482 aaKnown RBP3.76□□□□□ -1.81
COPB1-205ENST00000526527 CCDC96Q2M329 555 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 PGS1Q32NB8 556 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 C4orf46Q504U0 113 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 PRAMEF14Q5SWL7 426 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 AGAP9Q5VTM2 703 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 CLEC4GQ6UXB4 293 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 ZNF572Q7Z3I7 529 aaPredicted RBP3.76□□□□□ -1.81
COPB1-205ENST00000526527 GPR149Q86SP6 731 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 ZFP28Q8NHY6 868 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 SLC35B2Q8TB61 432 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 SLC9A6Q92581 669 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 RGMAQ96B86 450 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 PHACTR3Q96KR7 559 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 DUSP26Q9BV47 211 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 FAM204AQ9H8W3 233 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 PRDM11Q9NQV5 511 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 CNNM1Q9NRU3 951 aa3.76□□□□□ -1.81
COPB1-205ENST00000526527 RBM28Q9NW13 759 aaKnown RBP3.76□□□□□ -1.81
COPB1-205ENST00000526527 GEMIN8Q9NWZ8 242 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms