RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ACDQ96AP0 544 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 NUSAP1Q9BXS6 441 aaKnown RBP19.18■□□□□ 0.66
PVT1-220ENST00000524165 DNAJC25Q9H1X3 360 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 C2orf40Q9H1Z8 148 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 SCUBE2Q9NQ36 999 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 ANO2Q9NQ90 1003 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 SLC38A7Q9NVC3 462 aa19.18■□□□□ 0.66
PVT1-220ENST00000524165 PTPRDP23468 1912 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 PLXNB3Q9ULL4 1909 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 GON4LQ3T8J9 2241 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 ZNF638Q14966 1978 aaKnown RBP19.17■□□□□ 0.66
PVT1-220ENST00000524165 CITO14578 2027 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 PRAMEF12O95522 483 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 HMGB1P09429 215 aaKnown RBP19.17■□□□□ 0.66
PVT1-220ENST00000524165 RARRES1P49788 294 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 RUNX3Q13761 415 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 TRIM61Q5EBN2 209 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 GPR158Q5T848 1215 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 EEF1DP3Q658K8 133 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 GAREM2Q75VX8 874 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 APPL2Q8NEU8 664 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 RPLP0P6Q8NHW5 317 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 SUSD3Q96L08 255 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 CCDC43Q96MW1 224 aaKnown RBP19.17■□□□□ 0.66
PVT1-220ENST00000524165 FAM83CQ9BQN1 747 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 ATXN3LQ9H3M9 355 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 CCDC86Q9H6F5 360 aaKnown RBP19.17■□□□□ 0.66
PVT1-220ENST00000524165 GKN1Q9NS71 199 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 ASB3Q9Y575 518 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 NUB1Q9Y5A7 615 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 KALRNO60229 2985 aa19.17■□□□□ 0.66
PVT1-220ENST00000524165 C19orf57Q0VDD7 668 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 XKR4Q5GH76 650 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 GALNT17Q6IS24 598 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 KRT25Q7Z3Z0 450 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 PIGKQ92643 395 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 EXOC4Q96A65 974 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 HSD17B14Q9BPX1 270 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 HPS4Q9NQG7 708 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 INVSQ9Y283 1065 aa19.16■□□□□ 0.66
PVT1-220ENST00000524165 DENND4CQ5VZ89 1909 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 URB1O60287 2271 aaKnown RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 MARCH6O60337 910 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 ENGP17813 658 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 RPL9P32969 192 aaKnown RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 MAPK8P45983 427 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 DHPSP49366 369 aaPredicted RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 HNRNPDQ14103 355 aaKnown RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 KRT32Q14532 448 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 NPY5RQ15761 445 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 ALKAL1Q6UXT8 129 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 FAM177A1Q8N128 213 aaPredicted RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 HNRNPLLQ8WVV9 542 aaKnown RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 DDX12PQ92771 950 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 LRIG1Q96JA1 1093 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 EIF2AK1Q9BQI3 630 aaKnown RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 CCDC113Q9H0I3 377 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 TASP1Q9H6P5 420 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 FBRSL1Q9HCM7 1045 aaKnown RBP19.15■□□□□ 0.66
PVT1-220ENST00000524165 GPRC5CQ9NQ84 441 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 ADAMTS9Q9P2N4 1935 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 SHROOM3Q8TF72 1996 aa19.15■□□□□ 0.66
PVT1-220ENST00000524165 OTOL1A6NHN0 477 aaPredicted RBP19.14■□□□□ 0.65
PVT1-220ENST00000524165 USO1O60763 962 aaKnown RBP19.14■□□□□ 0.65
PVT1-220ENST00000524165 VNN2O95498 520 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 ALDH1A3P47895 512 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 GALK1P51570 392 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 APBB1IPQ7Z5R6 666 aaPredicted RBP19.14■□□□□ 0.65
PVT1-220ENST00000524165 NEK8Q86SG6 692 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 SLFN12Q8IYM2 578 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 RASEFQ8IZ41 740 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 MCPH1Q8NEM0 835 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 TSTD1Q8NFU3 115 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 BRF1Q92994 677 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 PSMG2Q969U7 264 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 OXCT2Q9BYC2 517 aaPredicted RBP19.14■□□□□ 0.65
PVT1-220ENST00000524165 TOPORSQ9NS56 1045 aaPredicted RBP19.14■□□□□ 0.65
PVT1-220ENST00000524165 USP20Q9Y2K6 914 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 TENM4Q6N022 2769 aa19.14■□□□□ 0.65
PVT1-220ENST00000524165 EDN1P05305 212 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 XRCC6P12956 609 aaKnown RBP eCLIP19.13■□□□□ 0.652e-7■■■■□ 23.7
PVT1-220ENST00000524165 BCKDHBP21953 392 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 GABRR2P28476 465 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 DPP6P42658 865 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 YARSP54577 528 aaKnown RBP19.13■□□□□ 0.65
PVT1-220ENST00000524165 SLC23A3Q6PIS1 610 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 Q6ZUG5 572 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 DNAJB7Q7Z6W7 309 aaPredicted RBP19.13■□□□□ 0.65
PVT1-220ENST00000524165 RASSF3Q86WH2 238 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 NAP1L4Q99733 375 aaKnown RBP19.13■□□□□ 0.65
PVT1-220ENST00000524165 P2RY13Q9BPV8 354 aa19.13■□□□□ 0.65
PVT1-220ENST00000524165 POLR3CQ9BUI4 534 aaPredicted RBP19.13■□□□□ 0.65
PVT1-220ENST00000524165 PLXND1Q9Y4D7 1925 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 TNFRSF10BO14763 440 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 CCNT1O60563 726 aaKnown RBP19.12■□□□□ 0.65
PVT1-220ENST00000524165 FAM193AP78312 1265 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 DUSP4Q13115 394 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 MAEAQ7L5Y9 396 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 SYT12Q8IV01 421 aa19.12■□□□□ 0.65
PVT1-220ENST00000524165 TRIM22Q8IYM9 498 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms