RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ATMINO43313 823 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 MSCO60682 206 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 SEC24DO94855 1032 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 ENO2P09104 434 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 LINGO3P0C6S8 592 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 SLURP2P0DP57 97 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 TARSP26639 723 aaKnown RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 EEF1GP26641 437 aaKnown RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 TXLNAP40222 546 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 HSPA13P48723 471 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 POLR2GP62487 172 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 CYP4F2P78329 520 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 PLOD1Q02809 727 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 CYP4F3Q08477 520 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 GALNT1Q10472 559 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 ITGB3BPQ13352 177 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 MTFR1Q15390 333 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 CMPK2Q5EBM0 449 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 KANK2Q63ZY3 851 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 KIAA1841Q6NSI8 718 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 FAM171BQ6P995 826 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 CCDC81Q6ZN84 652 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 CATSPERGQ6ZRH7 1159 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 ARHGAP36Q6ZRI8 547 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 C16orf86Q6ZW13 317 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 PLEKHH3Q7Z736 793 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 ERICH1Q86X53 443 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 SYTL1Q8IYJ3 562 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 PGBD3Q8N328 593 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 SDR42E1Q8WUS8 393 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 EFHD2Q96C19 240 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 SPATA17Q96L03 361 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 RPRD1AQ96P16 312 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 ACAP3Q96P50 834 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 KIFC3Q9BVG8 833 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 PPP1R12CQ9BZL4 782 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 YIPF3Q9GZM5 350 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 LMAN2LQ9H0V9 348 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 KANSL2Q9H9L4 492 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 METTL5Q9NRN9 209 aaKnown RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 KCND1Q9NSA2 647 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 ZFATQ9P243 1243 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 REV1Q9UBZ9 1251 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 CNOT6Q9ULM6 557 aaKnown RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 TMX2Q9Y320 296 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 FAM32AQ9Y421 112 aaKnown RBP7.98□□□□□ -1.13
HDAC3-216ENST00000523088 SNX9Q9Y5X1 595 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 DGKBQ9Y6T7 804 aa7.98□□□□□ -1.13
HDAC3-216ENST00000523088 RLFQ13129 1914 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ROBO3Q96MS0 1386 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 FAM221AA4D161 298 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 SLC15A5A6NIM6 579 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 GOLGA8MH3BSY2 632 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 L7N2F9 121 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 UBXN8O00124 270 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 KPNA5O15131 536 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 POLR2DO15514 142 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 PEX1O43933 1283 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ACSL4O60488 711 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 F2P00734 622 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 CD4P01730 458 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 HLA-DRAP01903 254 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 TFRCP02786 760 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 RETP07949 1114 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 SLC3A2P08195 630 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 CALM1P0DP23 149 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 CALM2P0DP24 149 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 CALM3P0DP25 149 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 CYP2C9P11712 490 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ALADP13716 330 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ELNP15502 786 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ATP4AP20648 1035 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 GARTP22102 1010 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 JAK1P23458 1154 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 HOXA6P31267 233 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 KRT20P35900 424 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 PURAQ00577 322 aaKnown RBP7.97□□□□□ -1.13
HDAC3-216ENST00000523088 DNAJC3Q13217 504 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 PPP2R5DQ14738 602 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 EPHA7Q15375 998 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 MYLK3Q32MK0 819 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ZSCAN23Q3MJ62 389 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 SBK1Q52WX2 424 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 C12orf60Q5U649 245 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 PHLDB3Q6NSJ2 640 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 FAM180BQ6P0A1 224 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 BORAQ6PGQ7 559 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 B3GNT6Q6ZMB0 384 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ZNF365Q70YC5 407 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 LPCAT2Q7L5N7 544 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 GPR142Q7Z601 462 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 NECAB2Q7Z6G3 386 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 HACE1Q8IYU2 909 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 IPMKQ8NFU5 416 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 STON2Q8WXE9 905 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 ARL8AQ96BM9 186 aa7.97□□□□□ -1.13
HDAC3-216ENST00000523088 SHISA4Q96DD7 197 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms