RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SPOPLQ6IQ16 392 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 CCDC137Q6PK04 289 aaKnown RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 BPHLQ86WA6 291 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-217ENST00000522117 ULK2Q8IYT8 1036 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 SLC25A41Q8N5S1 370 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 CCDC110Q8TBZ0 833 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 GDPD5Q8WTR4 605 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 UIMC1Q96RL1 719 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 A0A087WZG4 1122 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 CIB2O75838 187 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 PON1P27169 355 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 RCVRNP35243 200 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 CPA2P48052 419 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 KCNC4Q03721 635 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 SNAPC2Q13487 334 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 MAPK6Q16659 721 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 DCAF6Q58WW2 860 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 FYB2Q5VWT5 728 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 DTHD1Q6ZMT9 781 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 ALLCQ8N6M5 410 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 BTBD9Q96Q07 612 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 C17orf75Q9HAS0 396 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 MAGEF1Q9HAY2 307 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 QPCTLQ9NXS2 382 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 RRN3Q9NYV6 651 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 NINJ2Q9NZG7 142 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 ANKFY1Q9P2R3 1169 aa12.68□□□□□ -0.38
SPIDR-217ENST00000522117 TIAM2Q8IVF5 1701 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 GNA11P29992 359 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 HOXD13P35453 343 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 PPARGP37231 505 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 LRRC63Q05C16 580 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 OVGP1Q12889 678 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 KRT81Q14533 505 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 DPY19L2P1Q6NXN4 242 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 AAGABQ6PD74 315 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 DCLRE1AQ6PJP8 1040 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 TTC7BQ86TV6 843 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 TRABD2AQ86V40 505 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 GLIS3Q8NEA6 775 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 DDHD1Q8NEL9 900 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 SHKBP1Q8TBC3 707 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 ZNF496Q96IT1 587 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 ANKRD36BP1Q96IX9 119 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 MAELQ96JY0 434 aaKnown RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 ZNF696Q9H7X3 374 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 CLK4Q9HAZ1 481 aaKnown RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 CCDC88AQ3V6T2 1871 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 MYOCOSA0A1B0GUC4 107 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 B2RBV5 119 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 K7EPI3 171 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 TNFRSF10AO00220 468 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 DENRO43583 198 aaKnown RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 ITM2AO43736 263 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 ZBED4O75132 1171 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 CNOT3O75175 753 aaKnown RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 B3GALNT1O75752 331 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 RRM1P23921 792 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 PMLP29590 882 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 RPA3P35244 121 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 SLC18A1P54219 525 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 MYBPC1Q00872 1141 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 TMED2Q15363 201 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 USP41Q3LFD5 358 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 TOM1L2Q6ZVM7 507 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 TMPRSS6Q8IU80 811 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 CENPSQ8N2Z9 138 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 ACTRT2Q8TDY3 377 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 USP6NLQ92738 828 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 POP1Q99575 1024 aaKnown RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 NUP85Q9BW27 656 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 RIC8AQ9NPQ8 531 aa12.67□□□□□ -0.38
SPIDR-217ENST00000522117 RSL24D1Q9UHA3 163 aaKnown RBP12.67□□□□□ -0.38
SPIDR-217ENST00000522117 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 C5P01031 1676 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 PTPN2P17706 415 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 CDH3P22223 829 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 CDK16Q00536 496 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 E2F2Q14209 437 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 EFTUD2Q15029 972 aaKnown RBP eCLIP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 C4orf46Q504U0 113 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 ARSHQ5FYA8 562 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 C6orf163Q5TEZ5 329 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 C1orf146Q5VVC0 180 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 CCDC62Q6P9F0 684 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 IFNLR1Q8IU57 520 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 GUF1Q8N442 669 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 RBM15BQ8NDT2 890 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 TRPC4APQ8TEL6 797 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms